Desulfobacula toluolica: TOL2_C36300
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Entry
TOL2_C36300 CDS
T02268
Symbol
deaD
Name
(GenBank) DeaD: cold-shock DEAD box protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dto
Desulfobacula toluolica
Pathway
dto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOL2_C36300 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dto03019
]
TOL2_C36300 (deaD)
03009 Ribosome biogenesis [BR:
dto03009
]
TOL2_C36300 (deaD)
Enzymes [BR:
dto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TOL2_C36300 (deaD)
Messenger RNA biogenesis [BR:
dto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TOL2_C36300 (deaD)
Ribosome biogenesis [BR:
dto03009
]
Prokaryotic type
rRNA helicases
TOL2_C36300 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
PBD
CMS1
RdgC
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CCK81787
UniProt:
K0NS32
LinkDB
All DBs
Position
4234293..4236089
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AA seq
598 aa
AA seq
DB search
MPQNNLPLTGFDEMNLSPPVFSALQDVGYETPTPIQAMTIPHLIRNKDVLGQARTGTGKT
AAFALPLLSRIDLDNKRPQVLVLTPTRELAIQVAESFKTYGARMKGLNVLSVYGGQSYGI
QLNQLKKGVHVVVGTPGRLMDHMRKKTVSFADLFCVILDEADEMLHMGFIDDVEWILDRT
PPDSQTALFSATMPRPIQKIAQKYLTSPEEFFIKPDNTELNTIKQQYWMVNGAKKAHALT
RILEAVSFDGVIVFVKTKTATLELAKILEDKGFKAEALNGDLAQNARERTVNRLKNSHID
ILVATDVAARGLDVDRISHVINYDMPSKVDPYVHRIGRTGRAGRTGEAILFVSRNERWML
KVIEKATKQKIQEISLPSNKTINKKRIADFKQAITQTLESKDLNVFQELLEGYAQEQDIP
VVQVAAALAKLAHGDSPFLLPADKDKKTATAKPARKKQAAPKNISNNRNTTERTNKPGNT
ARKQTPKPMKKQTSSQKANITPTKETNIAPQEQASVPPLEKGMERYRIEVGRLHGVQAGN
IVGAIANEAGLDSKHIGHININQDFSFVDLPYGMPKEIFRLLKRTWVKSQQMSISKCA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaacaacttgcccttgaccgggtttgacgaaatgaacttgagcccccctgtg
ttttctgcattgcaggatgtgggctatgaaactccaaccccgatccaggcaatgaccatc
ccccatctgatccggaacaaagatgtgctgggccaggcccggaccggcaccggcaaaaca
gccgcctttgccctgccactgctatcccggattgaccttgacaacaaacggccccaggta
ttggtattgacccccacccgggaactggccatccaggtggcagaatcctttaagacctat
ggtgcaagaatgaaagggctgaacgtattgtccgtttacggaggacaaagttacggaatt
cagctgaaccagctcaaaaaaggcgtccatgtggtcgtgggaacacccggccggctcatg
gatcatatgcgaaaaaaaaccgtgtcatttgcagaccttttttgtgtaatcctggatgag
gcagatgaaatgcttcacatgggctttattgatgatgtggaatggatactggacagaacg
ccacccgattcacaaaccgctcttttctcagccaccatgcccaggccaatccaaaagatt
gcccaaaaatatcttacatcaccggaagaattttttatcaaaccggacaacacggaactt
aataccatcaaacagcaatactggatggtcaatggagctaaaaaagcgcacgccctgacc
cgtatactggaggctgtctcctttgacggggtgattgtgtttgttaaaaccaaaaccgca
acacttgagctggcaaaaattcttgaagacaaaggattcaaagccgaggccctgaacggg
gatcttgcccagaatgcaagagaacgaaccgttaaccggcttaaaaacagccatatcgac
attctggtggcaactgatgttgcggccaggggtcttgatgtggaccgaatctcccatgta
attaattatgatatgccttccaaggttgacccctatgtccacaggatcggcagaaccggc
agagccggccggacaggagaagccatcctgtttgtttcccgaaatgaacgctggatgctg
aaagttattgaaaaagccacaaaacaaaaaattcaggaaatcagcctgccctccaacaaa
accattaataagaagagaatagccgactttaagcaggccattactcaaaccctggaatca
aaagacctgaatgtttttcaagaactgcttgaaggatatgcccaggaacaggacatccct
gttgtacaggttgcagctgcccttgcgaaattagcccatggagacagccctttcctgttg
cctgcggataaagacaaaaaaaccgcaacagctaagccagcccgaaaaaaacaggctgcc
ccgaaaaacatttcaaataacaggaacacgacagaaagaacaaacaagccgggtaataca
gcaagaaaacaaacacccaaaccaatgaaaaaacaaacctcctcccaaaaagcaaatatt
actcccacaaaagaaacaaacattgctccccaggaacaagcaagtgtgccacccctggaa
aaaggcatggaaagataccgaattgaagtgggacgtctccacggggtccaggctggaaat
attgtcggagccattgcaaatgaagccggtcttgacagcaaacacatcggccatataaat
atcaaccaggatttttcctttgtggatcttccatacggtatgccaaaagaaattttcagg
ctcctgaaaagaacctgggtaaaatcccagcaaatgtcaatctcaaaatgtgcctga
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