Desulfobacula toluolica: TOL2_C39360
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Entry
TOL2_C39360 CDS
T02268
Symbol
pbpB
Name
(GenBank) PbpB: penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
dto
Desulfobacula toluolica
Pathway
dto00550
Peptidoglycan biosynthesis
dto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dto00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TOL2_C39360 (pbpB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dto01003
]
TOL2_C39360 (pbpB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dto01011
]
TOL2_C39360 (pbpB)
Enzymes [BR:
dto01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
TOL2_C39360 (pbpB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TOL2_C39360 (pbpB)
Glycosyltransferases [BR:
dto01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
TOL2_C39360 (pbpB)
Peptidoglycan biosynthesis and degradation proteins [BR:
dto01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
TOL2_C39360 (pbpB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
PBP_1A_C
Motif
Other DBs
NCBI-ProteinID:
CCK82092
UniProt:
K0NSW8
LinkDB
All DBs
Position
4610835..4613132
Genome browser
AA seq
765 aa
AA seq
DB search
MKKWYLISAVCLLGLGIIFYDHFLKFNTVVEEKFQGRLWELPARVYARPLELYPGMRLAP
DLFEKELNLMGYQNTGNMSGLDAPGKYVRTANRFELFCRPFNFGDEQMPERRFYIKIENN
RVVNLQTSPDRTDKTMERLDPVIVGGFYPSSMEDRILVTLDQTPPLLGNAIICVEDKTFY
SHYGIDPKSIFRAMLINLKNRRMSQGASTITQQLARNFFLTKEKTLIRKFNEMIMAAALE
LNYSKADILEAYINEVYLGQDGNRAIHGFGLAAYFYFGKSLTDLRPHEIALLVGMLKGPS
VYNPRRYPDRAMDRRNLILEMMEKQGLVSQALLKKFLAAPLDIIENPVRGHSPFPFYLDL
VKRQLLQEYKEADLKTMGIRIFTTLDPQVQLAAEHSVTDFLKQAPAGLEAGVVVTARASN
EVQALVGGKDFRYKGFNRALDAKRPIGSLVKPAVFLTALERPSTYTLVTPVDDNPVRVPN
PDGSYWSPENFDKTHHGQVKLYQALVHSFNVPTVRLGMNLGVESVLDTLEKMGLDHKPAA
FPSVLLGSLEMSPLQVAQTYQTLASGGFFTPIKCIRSIYRPDGQVLQRYPLTIEQRLDPG
AVFLLNKMLQAVVKEGTGKSLKKWVSDDLGIAGKTGTTNDLKDSWFAGFSGNRLAVVWIG
RDDNRSAGLTGSSGALQIFGRLMSRIPNAPLDLQAPGNVEWAVIDAQTGYLTQKTCPDAM
AVPFLKGSTPTRLHSCTSKAKTRYNDQETKKKPNILMDWLKEIFK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatggtatttaatatcggcagtgtgcctgctgggccttggaataattttttat
gatcattttttaaaattcaatacagttgtagaagaaaagttccagggccggttatgggaa
ctgccggcccgggtttatgcccgccccctggaactatacccgggcatgcgtctggccccg
gatctgtttgaaaaagagttgaacctcatggggtatcaaaatactgggaatatgagtgga
ttggatgcccctggcaaatatgtccgcacagcaaacaggtttgaacttttttgccggccg
tttaattttggtgatgaacaaatgccggagcgcaggttttatattaaaattgaaaataac
cgggtggtgaacctgcaaacttccccggaccggaccgacaaaacaatggagcgcctggac
ccggtcattgtcggcggattttatccgtcatccatggaagaccgcatcctggtgacactt
gaccagaccccgccattactggggaatgccatcatttgtgtcgaagacaagaccttttac
tcccactatggaattgatcccaaatcaattttcagggccatgctgatcaatttaaaaaac
aggcgcatgtcccagggtgccagcaccattacccagcaactggccaggaatttcttttta
accaaagaaaaaaccttgatccgcaagttcaatgagatgatcatggctgccgcactggag
cttaattacagtaaagccgatattctggaagcatacataaacgaggtctaccttggtcag
gacggcaaccgggccattcacggattcgggctggccgcttatttttattttggaaaatcc
ctgacggatctgaggccccatgaaatagctttgctggtcggcatgctgaaggggccttcg
gtttataaccccagacgatatcctgaccgggccatggaccggcgcaatcttattctggag
atgatggaaaaacagggacttgtctcacaagcactgttaaaaaaattcctggcagccccc
ctggatattattgaaaatcctgtcagggggcattccccgtttccgttttacctggatctg
gtcaagcgtcagttgcttcaagaatacaaggaggccgaccttaaaaccatgggcataagg
attttcaccaccctggatccccaggttcaactggcggcagaacacagcgtgactgatttt
ttaaagcaggccccggccggactggaagccggtgtcgtggtcactgccagggcaagcaac
gaggtacaggccctggtgggagggaaagacttcagatacaagggttttaaccgtgccctg
gatgcaaaacgacccatcggctccctggtaaagccagcggtcttcctgacggcactggaa
cgtccctccacctatacactggtcactccggtcgatgacaaccctgtcagggttcctaac
ccggacggcagttactggagccctgaaaattttgataaaacacaccatggacaggtgaag
ctgtaccaggccctggttcattcctttaatgtcccgaccgtcaggctcggcatgaatctg
ggagttgaatccgttttagacacgcttgaaaagatgggacttgatcataagccggctgcc
tttccttcggttcttctgggcagccttgaaatgtcaccgctccaggtggcccaaacctac
cagacccttgcatccggcggtttttttacaccgatcaaatgcatccgttctatttacaga
ccggacggtcaggtacttcaacggtatccgctgaccattgaacagcgtcttgatccggga
gccgtttttttattaaacaaaatgcttcaggctgtagtaaaggaaggcaccggcaaatca
ctgaaaaaatgggtgtccgatgatctgggcatagccggaaaaaccggcaccacaaatgat
cttaaggacagctggtttgccggtttttccggcaaccggctggcggtcgtgtggatcggc
cgggatgataaccgttctgcagggcttaccggctcatccggggctttgcagattttcggg
cgtctcatgagccggattccaaatgcccctctggatctgcaggcacctggaaatgttgag
tgggctgtcattgatgcccaaacaggttatctaacccaaaagacctgccccgatgcaatg
gcggttccctttctcaaaggatcaacgccaacccgtttgcattcctgcacttcaaaagca
aaaacccgatataatgatcaagaaacaaaaaaaaagccaaacattttgatggactggctg
aaagagattttcaaatga
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