Dissulfurispira thermophila: JZK55_06610
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Entry
JZK55_06610 CDS
T07039
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dtp
Dissulfurispira thermophila
Pathway
dtp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JZK55_06610 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtp03021
]
JZK55_06610 (rho)
03019 Messenger RNA biogenesis [BR:
dtp03019
]
JZK55_06610 (rho)
Transcription machinery [BR:
dtp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JZK55_06610 (rho)
Messenger RNA biogenesis [BR:
dtp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JZK55_06610 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
AAA
DUF3086
S1CSD-TOTE-2
ATPase_2
AAA_25
M_Eco57I_C
Spore_III_AA
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCB95739
UniProt:
A0A7G1H0D0
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All DBs
Position
complement(663997..665259)
Genome browser
AA seq
420 aa
AA seq
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MENYISISELKEKNIDALTHLAKELNVEGATGMRKQELIFAILQAQAEKAGNVYGSGVLE
ILPDGFGFLRSPDYSYLPSPDDIYVSPSQIRRFTLRTGDFVSGQIRPPKENERYFALLKV
ETINGETIEDNVSRPLFDNLTPYYPTEKVNLEYSAEDYSTRVMDLITPIGKGQRGLIVAA
PRTGKTMLLQSIAKAIKKNHKEIHLIILLIDERPEEVTDWKRQVSTAEIISSTFDEPPQR
HCQVSEMVIERAKRLVETKRDVVILLDSITRLARAYNTITPTSGKVLSGGLDANALQRPK
RFFGTARNIEEGGSLTILATALVDTGSRMDDVIFEEFKGTGNMELHLDRKLVDKRIFPSI
DINSSGTRKEELLVAPDVLNKMWILRKVLNPLSTVESMEFLLSKLKGTKNNKDFLEMMNK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattatatttcgatttctgaattaaaggaaaagaatattgatgcgctgacgcac
cttgcaaaagaattaaatgttgaaggtgccacaggcatgagaaaacaggaacttatcttt
gccattctgcaagcacaggctgaaaaggctggtaatgtttacggctcaggggttttagaa
atactacccgatggatttggctttctccgttcgcctgattacagttaccttccttctccc
gatgatatatatgtatctccttcacagattagaagatttacattaaggacaggtgatttt
gtatctggacagataagacctccgaaagaaaacgaaagatattttgctctcttaaaagta
gaaaccataaatggtgaaactatagaagacaatgtaagccgtccattattcgataatctt
acaccatattatccaacagaaaaagtaaacctcgaatacagcgccgaagactattctaca
agggtcatggatcttataacacccataggaaaaggacagcgtggtcttatagtagcagca
ccgagaaccggaaagaccatgttactgcagtcaatagcaaaggcaattaaaaagaatcat
aaagagatacacctcataatactcctgatagatgaaagacctgaggaagtcacagattgg
aaaagacaagtgagtactgctgaaattataagctccacatttgatgagccaccgcagagg
cactgtcaggtctctgaaatggttatagaaagggcaaagagattagtagagacaaaaaga
gatgtcgttattctccttgacagtataacaaggctcgcaagggcatataatacaataaca
ccgacaagtggaaaggtgctatcaggtggacttgatgctaatgccctccagagacctaaa
agattttttggcactgcaagaaatatcgaagaaggcggcagcctcacaatacttgcaaca
gcacttgttgatacaggaagcagaatggatgatgtcatattcgaagaatttaagggaaca
ggcaatatggaactccaccttgaccgcaagcttgtggataagagaatattcccaagcatt
gatattaattcatcagggacaagaaaggaagaacttcttgttgcccctgatgtcctgaac
aagatgtggatattgagaaaggtcttaaatcctttaagcactgttgaaagcatggaattt
ctgctcagcaaactaaaaggaacaaaaaataacaaagattttcttgagatgatgaataaa
tag
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