Dissulfurispira thermophila: JZK55_20930
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Entry
JZK55_20930 CDS
T07039
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dtp
Dissulfurispira thermophila
Pathway
dtp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JZK55_20930 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dtp03019
]
JZK55_20930 (pnp)
03016 Transfer RNA biogenesis [BR:
dtp03016
]
JZK55_20930 (pnp)
Enzymes [BR:
dtp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JZK55_20930 (pnp)
Messenger RNA biogenesis [BR:
dtp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JZK55_20930 (pnp)
Transfer RNA biogenesis [BR:
dtp03016
]
Prokaryotic type
tRNA degradation factors
JZK55_20930 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_2
S1_RRP5
KH-I_KHDC4-BBP
DUF5813
OB_RRP5_4th
FOXO-TAD
DUF5865
Motif
Other DBs
NCBI-ProteinID:
BCB97171
UniProt:
A0A7G1H4Y2
LinkDB
All DBs
Position
complement(2054391..2056511)
Genome browser
AA seq
706 aa
AA seq
DB search
MMTKVELDIKGKSLVIETGQMAKQSSGAVVIKYGDTVVLATAVADKRVKEGLDFFPLTID
YQEKTYSAGKIPGGFFKREGKPSEKEVLTSRLIDRPIRPLFPKGFYSETQGIASVLSYGS
ENVSDILGIIGMSAAIHISDIPFNGPVGAVRIGRLKGDKDLIINPELSEVDNLDLNLVVA
GTEDAVTMVEGGGAEVSELLILEAIDLAHKEIKRVVAVQNELRKLVGKEKRQLVALEERP
EFAKQIRDFVAERMKEAIRIPGKQRRQEALDIILEDTIKHFNTLENGEKFFGDSAKDLTR
DIANIFDDYEKEIVRNMILYEGVRADGRKPDEIRHIECHTGILPRAHGSALFIRGETQSL
VVTTLGTAEDEQKIDSLEGETYKSFMLHYNFPPFSVGEVKPLRSPGRREIGHGALAERAL
KYVIPSKEIFPYTIRVVSDILESNGSSSMATVCGATLSLMDAGVPISSPVAGIAMGLIKE
EEKVVVLTDILGLEDHLGDMDFKVAGTENGITAFQMDVKISGVSREIMRNALEQARIGRL
YILDRMKEAMPFPKKELSPHAPRIYTMQIKQDKIRDVIGTGGKVIRGIIEQTGVKIDIND
TGLINIASPDEESAKKAIDIINGIVAEAELGRIYMGKVVRIADFGAFVEILPGVDGLLHI
SQISDKRIAKVTDELNVGDEVLVKVIEIDNQGRIRLSRKEAMRERQ
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgatgaccaaagtagagcttgatattaaagggaaaagtctggtgatagagaccggacag
atggcaaagcagtcaagtggagctgttgttataaaatatggagatactgttgtacttgct
acggcagttgcagataaaagggtaaaagaggggctggattttttcccacttaccattgat
tatcaggaaaagacatattcggcaggtaaaataccaggaggattctttaagagagagggt
aagccttctgaaaaagaggtgctaacatctcgccttattgacaggcctatcaggccattg
tttccaaaaggattttattctgagactcaaggcatagcttctgtgctttcatacggcagc
gaaaatgtgtcggacattttaggcataatcggcatgtctgctgcaatacatatttctgat
attccatttaacggacctgttggtgcagtcaggattggacggcttaaaggtgataaagat
ttgataatcaatcctgagctgtcagaggttgataatcttgatctcaatcttgtggtggca
gggacagaggatgctgtgaccatggtagaaggtggtggtgcagaggtctctgaattactc
attcttgaagctatagaccttgcccacaaagaaataaagagagtagtagctgtccagaat
gaactgagaaaattagtcggtaaagaaaagagacaattggttgcattagaagaaagacct
gaatttgcaaagcagataagagattttgttgctgaaaggatgaaagaagctatacgcatc
ccaggtaagcagcgcagacaagaagcattggacataattttagaagatactataaagcat
tttaatacactcgaaaatggggagaaattttttggggattctgcaaaagatctcacaaga
gatatagctaatatatttgatgattatgaaaaagagattgtaagaaatatgatactctac
gagggtgttagggcagatggtagaaagccagatgaaataaggcacatagagtgtcacaca
ggtattttgccaagggcacacggctcagcgcttttcataaggggagagacccaatcgctt
gtagtaactacacttggcactgctgaagatgagcagaaaatagattcactcgaaggtgaa
acatataaatcatttatgctgcattacaattttcctcctttcagtgtgggtgaggtaaaa
cctcttcgatcacccggtagaagggagatagggcatggtgctttagcagaaagggcactg
aagtatgtaattccttcgaaggagatttttccttatacaatcagggttgtttcagatatt
ttggagtcaaatgggtcttcttcaatggcaacagtatgtggtgctacactttctctgatg
gatgcgggtgttcctatatcttcacctgttgctggcattgcaatgggtcttataaaagag
gaagaaaaggttgttgtacttaccgatattcttgggcttgaagaccacctcggcgatatg
gattttaaagttgctggcacagaaaatggtattacagcctttcagatggatgtaaaaata
agtggtgtaagtcgagaaattatgagaaatgcccttgagcaggcaagaatcgggaggctc
tatattcttgatagaatgaaagaggcgatgcctttccctaaaaaggagctttcccctcat
gcaccaagaatatatacaatgcagataaaacaggacaaaataagggatgttataggaacc
gggggtaaggtaataagagggattatagaacagacaggtgttaagatagacataaatgac
acaggtttgataaatattgcatctccagatgaggaatcagctaaaaaggctattgatatt
ataaacggtattgttgcagaggcagagcttggaaggatatatatgggaaaagtagtgcgc
atagctgattttggagcttttgtcgaaatactccccggtgttgacgggcttcttcatata
tcacagatatctgacaaaagaatagcaaaggttaccgatgaacttaatgttggcgatgaa
gttctggtaaaagtcatagagatagataatcagggaaggatcaggctaagtagaaaagaa
gcaatgcgtgaaagacagtag
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