Candidatus Desulfovibrio trichonymphae: RSDT_0033
Help
Entry
RSDT_0033 CDS
T05578
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dtr03016
]
RSDT_0033 (truB)
Enzymes [BR:
dtr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RSDT_0033 (truB)
Transfer RNA biogenesis [BR:
dtr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RSDT_0033 (truB)
Prokaryotic type
RSDT_0033 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BAV91545
UniProt:
A0A1J1DNY5
LinkDB
All DBs
Position
46493..47434
Genome browser
AA seq
313 aa
AA seq
DB search
MTGADIPPIGHNRTTAPQLHGVLVVNKPSGPTSGRCLAAIKRLGQKKIGHAGTLDPLAGG
VLLVLLGQATKLSSHLLAGGGKVYSGTVRLGQTTDTWDSQGRIIAEAPWEKVSPEAVRRE
IALWREMRKQLVPPYSAAKHEGQPLYRLARKGRDVPQKVKRMEISQADTLDVSLPFVRFR
VACRSGAYIRSLAHSLGTRLGCGAVLTELTREYSHPFGLDAARSLRDIVAEPALLATSLR
SIVDALPGWTRVELTPDEAWRVRNGMPVFRVSAKRPTEEDEYALLLYRGEAFALARRGAD
VAHCWTVLRGLWN
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgactggagcagacattccgcctattgggcataaccggacgactgcgccgcagctgcac
ggcgtgcttgtggtgaacaagccttccggaccgacatccggccgctgccttgcggcaatt
aaacgtttggggcagaaaaaaatcggccatgcgggcacgctggatcccttggccgggggc
gtgctgctggtgctgctggggcaggccaccaagctttcttcccatctgctggcgggcggg
ggcaaggtgtacagcggcacagtgcgtctcgggcagacgacagacacctgggacagtcag
ggcagaatcattgctgaagccccatgggaaaaggtcagccctgaggctgtgcggcgggag
atcgctttgtggcgggagatgcgcaagcagcttgtgccgccttactcagctgcaaagcac
gaggggcagcctttatacaggctggcccgcaagggccgcgatgtgccgcaaaaggtcaaa
cgcatggaaatttcacaggcggacacgcttgatgtgagcctgccgtttgtgcgctttcgt
gtcgcctgccgttccggcgcctatatacgctccctggcccacagcttggggacgcgactt
ggttgcggagccgtgctcacggaactgacccgggagtatagccaccccttcggtcttgat
gctgcccgcagtctgcgggacattgtggctgaaccagctctgctggccacaagcctgcgg
tcaattgtcgatgccctgcccggctggacaagagtggaactcacgcctgacgaggcttgg
cgggtgcgcaacgggatgcccgtcttccgcgtgtcggcaaaaaggccgacggaggaggat
gaatacgcgctcctgctttacagaggagaggcgtttgcgctggcaaggcgcggagcagac
gtggcgcactgctggaccgtgttgcgggggctttggaactaa
DBGET
integrated database retrieval system
