Candidatus Desulfovibrio trichonymphae: RSDT_0050
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Entry
RSDT_0050 CDS
T05578
Symbol
fumB
Name
(GenBank) fumarate hydratase, beta subunit
KO
K01678
fumarate hydratase subunit beta [EC:
4.2.1.2
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00020
Citrate cycle (TCA cycle)
dtr00620
Pyruvate metabolism
dtr00720
Other carbon fixation pathways
dtr01100
Metabolic pathways
dtr01110
Biosynthesis of secondary metabolites
dtr01120
Microbial metabolism in diverse environments
dtr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RSDT_0050 (fumB)
00620 Pyruvate metabolism
RSDT_0050 (fumB)
09102 Energy metabolism
00720 Other carbon fixation pathways
RSDT_0050 (fumB)
Enzymes [BR:
dtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
RSDT_0050 (fumB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fumerase_C
DUF7550
PNP_UDP_1
Motif
Other DBs
NCBI-ProteinID:
BAV91562
UniProt:
A0A1J1DP05
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All DBs
Position
complement(65813..66370)
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AA seq
185 aa
AA seq
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MSQPKRITAPFDDATARSLRAGDSVLVTGTIIAARDAAHKRLVETLQRGEKLPVDLKGAV
VYYVGPTPAKPGHPIGSAGPTTSGRMDAYTPTLMGQGLKGMIGKGYRKPEVVEAMKKYGV
PYLAAVGGVGALIARSIKKYTVLAYEELGPEAVAAMEVVDFPAIVVIDSEGNNYYTQGQA
PYQEI
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaccaaaacgaatcaccgctcctttcgacgacgccaccgcccgttccctgcgc
gctggcgacagcgtgcttgtgaccggcaccattattgccgcccgagacgccgcacacaaa
cgacttgttgaaactctgcagcgcggcgaaaagctgccggtggatctaaaaggcgccgtt
gtctactatgtcggccccacgcccgccaaaccggggcaccccatcggatccgccgggccg
acgacatcgggacgcatggacgcctacaccccaactcttatggggcaggggctcaagggc
atgataggcaaaggatatcgcaagccggaagtcgttgaagccatgaaaaaatacggtgta
ccctatcttgccgccgtgggcggcgttggagcgctcattgcccgatccatcaaaaaatat
accgtgctcgcatatgaagaactgggacctgaagctgtcgcggcaatggaagttgttgat
tttccagctattgttgtcattgattccgaagggaataattattatacgcaggggcaggct
ccgtatcaggagatctag
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