Candidatus Desulfovibrio trichonymphae: RSDT_0057
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Entry
RSDT_0057 CDS
T05578
Symbol
polA
Name
(GenBank) DNA polymerase I
Organism
dtr
Candidatus Desulfovibrio trichonymphae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
BAV91569
UniProt:
A0A1J1DP09
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Position
74797..77532
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AA seq
911 aa
AA seq
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MPLKDRLNLAADPIFLMDGSAFIYRGFFANQNLRRSDGFPTGALVLLTRLLLRILCKEKP
RHLLFIRDGKGKNFRHEIYPLYKANREAMPEDLVMQLDPIERMVRALGLNLEISQGCEAD
DCIASLAARFSAEHPVIIVGGDKDLKQCLSRRVFLWDPAGKDENLITETDFRDENGVSPA
QWPDVQALLGDTSDNIPGVPGIGPKAAKQIFEVCSSLEEIRAGFSRLPPKFRSKLCGHLD
KAFIWRRLTTLSLTVCADMTLEGMLVRPINALECRSLTDEFELVVLRREMENLLRLQQSA
ASPETPALPPPNREKSATKNTTKRPAPHARKEKQTNLLDMADPTPTLPATEASALADLPY
CVDRTVVLLWSGVTGEPLRIAVGGAWRDDQHAPATAPLQEFAWAADPTTLAPWLSGAGRL
VCTDFKILLRNGICRAYPSCASPPCFDLGLAAWLLNPEDNDYSWPRLKARFGAGLQRDTV
GPAGLALAVAKILQTRLVQNNLDGLYAEMELTLTPVLAAMEERGVAIDATAFQTFLVDVQ
TEINNLTAKIYSTAGTSFNLRSARQLGETLFNVLHLPASRKTRGGQASTSQETLEKLAGR
HTVVDLVLQFRKLEKIRSTYLEPLPRLVDQAGRLHTTFNQKGTATGRLSSSNPNLQNIPV
RGTLGKRMRASFIAAPAHTLVCADYSQIELRVLAHMSQDATLLDAFHNNEDIHARTAALI
YDLPQDKVSRDERRNAKTINFGLIYGMGAQKLARDLKIAAAEAKDFIARYFAHLTGLKAF
YDNVERLAKQQGFVSTLGGRRRFLPSIHSANDQAFALARRQAINTMIQGSAADIIKLAML
AVDNDTELASMHAHLLLQVHDELLLEVPEEKAQAAGARTAALMAAVAPAGAELSVPLAVD
WGVGRNWAEAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgaaagatcgtctgaacctcgccgctgaccccatatttctgatggacggctca
gccttcatttatcggggatttttcgccaaccagaacctgcggcgttcggacgggttcccc
acaggcgcgcttgtgctgttaacccggcttttactgcgcattttatgcaaggaaaaaccg
cgccacctgcttttcatacgggacggcaagggcaaaaacttccggcacgagatataccca
ctgtacaaggccaaccgcgaagccatgccggaagatctggtcatgcagctcgaccctatt
gaacgcatggtgcgcgctttgggactgaacctcgaaatctcacagggctgcgaggcggac
gactgtattgcctctctggcggcccgtttttctgcggaacatccggtgatcatcgtcggc
ggtgacaaagatctaaaacaatgtctctcccggcgggtttttctatgggatcccgcggga
aaagacgaaaatttgataacggaaaccgatttccgggacgaaaacggtgtcagccccgcc
cagtggcctgacgtgcaggctctgctgggcgatacgagcgacaatattcccggcgtgcct
ggcataggccccaaagcggcgaaacagatatttgaggtttgcagcagccttgaagaaata
cgcgccggcttttcccggctgccgccgaaattccggagcaagctgtgcgggcatttggac
aaggccttcatctggcgcaggttgacaacattgtcgctgaccgtctgtgcagatatgact
cttgagggtatgctcgtgcggccgataaacgcgttggaatgtcgatcgctgacagacgaa
tttgaactcgttgtcctgcgtcgggaaatggaaaatttgctgcgccttcaacagtcggcg
gcatctcctgaaacgcccgcgctgccgccgccgaatcgcgagaaaagcgccacaaaaaac
acgacaaaacgcccagccccgcacgcaagaaaagaaaagcagaccaacctgctggatatg
gcggatcctacgcctacgttgcccgcaacagaggcgtctgctcttgcggatttgccgtac
tgcgtcgaccgcactgtcgttctgctctggtccggcgtcacgggagaacccttgcgtatt
gccgtgggcggtgcgtggcgggacgatcagcatgcgcctgcaaccgccccgttacaggaa
tttgcatgggcagccgacccaacaacgcttgcgccctggctttccggagccggccgtctg
gtctgcacggatttcaaaattctgctgcgcaacggaatatgccgcgcatatccgtcctgc
gcatcgccgccctgctttgacttgggactcgccgcatggttgctgaaccctgaagacaac
gactattcctggccccggctgaaagcccgcttcggtgccggcctgcaaagggacacagtc
ggcccggcgggtcttgctcttgctgtggccaaaatcctgcaaacgcgtcttgtccaaaac
aaccttgatggcctttacgcggagatggaactgactttgacgccggtgctggccgcaatg
gaagaacgcggcgtggcgattgacgcaacggcttttcaaaccttcctcgtcgatgtgcaa
actgagatcaacaacctcacagcgaaaatctattcaacggcaggtacatccttcaatctg
cgttcagcgcgacagctgggtgaaacgctctttaatgtgttgcaccttcctgcgtcgcgc
aaaaccagaggtgggcaggcatccacctcgcaggaaacgttggaaaagctggccggacgt
cacacagtggtggatcttgttttacaattccgcaaactcgaaaaaatacgttccacatat
ctggagcccttgccgcgccttgtggatcaggcaggacgcctgcacaccaccttcaatcaa
aaaggcacagccacaggacgcctttcatccagcaaccccaatctgcagaatattcccgtg
cgggggactctcggcaaacgcatgcgcgcatcgtttatcgccgcgccggcgcacacgctt
gtctgcgccgactattcccagatagaattgcgtgtgcttgcgcacatgtcacaagacgca
acgctgcttgacgcctttcacaacaatgaagacattcatgcccgcactgcggcgttgata
tatgatctgccgcaggacaaggtgagtcgggacgagcggcgtaacgccaaaacaatcaat
tttggcctgatctacggcatgggcgcgcaaaaactggcaagagatctcaaaatagccgcc
gcagaggccaaagattttattgcccgctactttgcacacctcaccggtctgaaagcattt
tacgacaacgtggaacgtcttgccaaacaacagggtttcgtcagcacattgggcggacgc
cgccgctttttgccgagcatacattcagcaaacgaccaagcttttgcgcttgcgcgccgt
caggccatcaacacgatgatacagggctccgcggcggatatcatcaagctggccatgctg
gctgtggacaacgacacggagctggcgagcatgcacgcccatctgcttttgcaggtgcac
gatgaactgctgctcgaagttccggaggaaaaagcgcaggccgcaggcgcgcgaacagcc
gcactgatggctgccgtcgcgcccgcaggcgcggaactctccgtgcctctcgcggtggac
tggggcgtggggcgaaactgggcagaagcccattag
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