Candidatus Desulfovibrio trichonymphae: RSDT_0085
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Entry
RSDT_0085 CDS
T05578
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RSDT_0085 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dtr01007
]
RSDT_0085 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dtr03016
]
RSDT_0085 (lysS)
Enzymes [BR:
dtr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RSDT_0085 (lysS)
Amino acid related enzymes [BR:
dtr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RSDT_0085 (lysS)
Transfer RNA biogenesis [BR:
dtr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RSDT_0085 (lysS)
Prokaryotic type
Other AARSs
RSDT_0085 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BAV91597
UniProt:
A0A1J1DSH9
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All DBs
Position
complement(108432..110015)
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AA seq
527 aa
AA seq
DB search
MEDREKKKKPAIRLSTKSPHAAYFMPMLESIAAREGLNEVLKHRVSKACDLLDAGVPLFP
NNFRKQHHIAAVLEDFGPLDAEALAGRKDVVVLAGRIVSWRSFGKVAFFHLMDDSGRIQC
YATKKNIDERSSLVVKKLEVGDIVGVSGRLFRTKTGELTLNCVGVTLLTRSMRPLPEKYH
GLKDMETRYRQRYVDLIVTPRAREVFQKRSLIVHEFRVVMEEAGFMEVETPMMQPLPGGA
TARPFTTHHNTLDLRLYMRVAPELYLKRLLVAGFEKVFELNRNFRNEGIDTRHNPEFTMC
EFYWAYATFEDLMDFTEKLFAHIAVRVCGSCVVTYQGQKIDLTPGRWKRLSFYDSLTQIG
GHAADFYNNYAKVRNYIRERGEKITEKESLQKLHAKLFDLDVEDKLVQPHFIYHYPTEIS
PLSRRNNDRPELTDRFELFITGREMSNAFSELNDPVDQRLRFEEQALEKEAGDEDAHSLD
EDYLRALEYGMPPAAGQGVGIDRLVMLLTDSPSIREVILFPLLRPEF
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaccgagaaaagaaaaagaagcccgccatacgcctgagtaccaaatcgccgcac
gcggcatactttatgcccatgctagagagcatagccgcgcgcgagggtttgaacgaagtt
ctcaaacaccgcgtcagcaaagcctgtgacctgctagacgccggcgtgccgctctttccc
aacaatttccgcaaacagcaccatatcgccgccgtgctggaagacttcggcccgcttgac
gcggaggcgctggccgggcggaaggacgtcgtcgtgctggccggacgcatcgtctcatgg
cgttctttcggcaaagttgccttttttcacctcatggacgacagcgggcgcatacagtgc
tacgccacgaaaaaaaatattgacgaacgctcctcccttgtcgtcaaaaaactggaagtg
ggcgatattgtcggggtaagcggccgcctgttccggacaaaaacaggcgaactcaccctc
aactgcgtcggggtaactttgctgacccgctccatgcgtcccctgccggaaaaataccac
ggtctgaaagacatggagacacgctaccgccagcgctatgtggatttgattgtcacgccg
cgcgcacgggaggtctttcagaaacgtagtctaattgtacatgaatttcgtgtagttatg
gaagaagcaggcttcatggaagtggaaacgcccatgatgcagcccctgcccggcggagcg
acggcgcgcccctttaccacccaccacaacacgctggacctgcggctgtatatgcgtgtc
gcgccggagctgtatttaaaacgcctgctcgtggccggctttgaaaaagtgtttgaactc
aaccgcaacttccgcaatgagggcatcgacacgcggcacaacccggaattcaccatgtgt
gaattctactgggcgtacgccacatttgaagaccttatggactttacggaaaagctcttc
gcccacatcgccgtcagggtctgcggctcctgcgtcgtgacctatcaggggcagaaaata
gacctcactcccggccgctggaaacgcctgagcttttatgactccctcacgcagatcggc
gggcacgcggcagatttttacaataactacgcgaaagtgcgtaactatatccgcgaacgt
ggcgaaaaaatcacggaaaaagaaagcctgcaaaaactccatgccaaactttttgatctg
gatgtggaagacaagctggtgcagccgcatttcatctaccattatcccacggaaatttca
ccgctgtcgcgccgcaacaatgatcggcccgaactgacggaccgctttgagcttttcata
accgggcgcgaaatgtccaacgccttttccgagctgaacgacccggtggaccagcgcctg
cgctttgaagaacaggcgctggaaaaagaggccggcgacgaagatgcccacagcttggac
gaggactatctgcgcgcccttgaatacggcatgcccccggcggcgggccagggggtcggc
attgaccgccttgtcatgctgctcacagactcgccctccattcgcgaagttattctcttc
cccctgttgcggccggaattttag
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