Candidatus Desulfovibrio trichonymphae: RSDT_0163
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Entry
RSDT_0163 CDS
T05578
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RSDT_0163 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dtr01007
]
RSDT_0163 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dtr03016
]
RSDT_0163 (valS)
Enzymes [BR:
dtr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
RSDT_0163 (valS)
Amino acid related enzymes [BR:
dtr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RSDT_0163 (valS)
Transfer RNA biogenesis [BR:
dtr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RSDT_0163 (valS)
Prokaryotic type
RSDT_0163 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
ABC_tran_CTD
RUBY_RBDX
tRNA-synt_1f
X
Motif
Other DBs
NCBI-ProteinID:
BAV91675
UniProt:
A0A1J1E1C3
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All DBs
Position
complement(216536..219244)
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AA seq
902 aa
AA seq
DB search
MTNQKALAKGYEPKNVEAKWRKHWEETNLFTPDANAPGESFSIVIPPPNVTGALHMGHAL
NLTLIDVLCRHARQKGKNTLWIPGIDHAGIATQNVVERALAAEGKNRRELGREAFVERVW
AWRADYGHRILDQIRALGASVDWTRLRFTMDDGLSAAVRKVFVRLYNEGLIYKGKYIINW
CLRCHTALADDEVEHEQQKGRLWRVRYHLADGSGSIAVATTRPETIPGDTAVCVHPEDAR
YAALIGKNALVPVLGRSVPIIADAYVDKEFGTGALKVTPCHDHNDWALGSKHHLKFIQVI
DENGLMTHDAGPYAGLSKEICREKIVADIAAAGDMLSVEDMEHAVGQCYRCRTAVEPHVS
TQWFVAATKLAPAARDATPALTQIYPESWIKTWNHWLDNIRDWCISRQIWWGHRIPAWIC
PACSALTVAEENPAACSSCGAGDLAQDEDVLDTWFSSALWPFSTMGWPEKTAELARWYPT
SVLVTGFDILFFWVARMMMMGLHFMDKPPFRHVYLHALVRDAAGRKMSKSTGNVIDPLAM
TEKYGCDALRFTLTAFAAMGRDIRLSEKRIEGYRHFVNKLWNAARFALMHLAAAPEPVDP
RTVRGLHHQWILHRLEAVKNGMDQAFEEYRFNDAARSGYKFLWNEFCDWYLELIKPDLQS
DDATRANTARHVLQLALREVLVLLHPIMPFVTAEIWQALPSATDMTDTAAAELAVTPWPP
ARPCCVRETAARHMEIIQEVIVAVRTMKAELGINPPQKVSLLLRPADAAQAALLEENREM
IMTLARLGSLTTDADADAPKASASSVAQGCQIIMPLRGAVDITSELARLDKELTKMEKDV
AAVNKKLCNESFVSRAPADVVASEQERAAHLLNAKAKLLALKERFTQASADKEISPAVQD
KP
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatcagaaagcgctcgccaaaggctatgagcccaaaaatgtggaagccaagtgg
cgcaaacactgggaagagacaaacctgttcacgccggacgcgaacgcgcccggcgagtct
ttttccattgtcatcccgccgcccaacgtcaccggcgcactgcatatggggcacgcgctg
aacctgaccctcatagacgtgctctgccgccacgcgcgccagaagggaaaaaatacgctc
tggattccgggcattgaccacgcgggcatagccacgcaaaatgtggtggagcgcgcactt
gcggcggaagggaaaaatcgccgggaactgggacgcgaagcttttgtggagcgtgtctgg
gcctggcgcgcagactacggccaccgcattctggatcagatcagggcactaggcgcttcc
gtagactggacgcgcctgcgcttcaccatggacgacggcctctccgccgccgtgcgcaaa
gtttttgtgcggctctacaacgaaggcctgatttacaagggcaagtatatcatcaactgg
tgcttgcgctgccacaccgcgctggccgatgacgaagtggaacacgaacagcaaaaaggc
cgtctctggcgcgtgcgctatcatctggccgacggctccggttcgattgccgtcgccacc
acacggccggaaacaataccgggcgacactgccgtctgcgtgcacccggaagacgcgcgc
tatgcggctcttatcggcaaaaacgcgcttgtgcctgttttggggcgcagcgtacccatc
attgccgatgcatatgtggacaaagagttcggcaccggcgcgctgaaagtaacgccctgc
cacgaccacaacgactgggcgctgggcagcaagcatcatcttaaatttattcaggtgatt
gacgaaaacggcctgatgacgcacgacgccgggccgtatgccggcctttccaaggagatc
tgccgcgaaaaaatcgttgccgatatagcggcggcgggggacatgctcagcgtggaagat
atggaacacgccgtcggccaatgctaccgctgccgcacagccgtggaaccacacgtttca
acccagtggtttgtggcggccacaaaactggccccggccgcacgcgacgcgacaccggca
ctcacgcagatctaccctgaatcatggatcaaaacatggaatcactggcttgacaatatc
cgtgactggtgcatcagccgccagatatggtggggccaccgcatacccgcgtggatctgc
cccgcctgcagcgcgctgaccgttgccgaagaaaaccccgccgcctgttcctcctgcggc
gcaggcgatctcgcgcaggacgaagacgtgctggacacctggttttcctcggcgctctgg
cctttctccaccatgggttggccggaaaaaaccgcggagcttgcgcgctggtaccccacc
tctgtgcttgtgacgggctttgacattctctttttctgggtagcccgcatgatgatgatg
ggcctgcactttatggacaaacccccgttcaggcacgtttatctgcacgcgcttgtgcgc
gacgccgcaggccgcaaaatgtccaaatccacgggcaacgtcattgacccgctggccatg
acggaaaaatacggctgcgacgccctgcgcttcacgctcacggcgttcgcggccatggga
agagatatacgcctttccgaaaaacgcattgaaggctaccgccattttgtgaacaaactg
tggaatgccgcccgcttcgccctgatgcatcttgcggctgcgccggagcctgttgacccg
cgcactgtgcggggtctgcaccaccagtggattctgcaccgtctggaggccgtcaagaac
ggcatggatcaggcatttgaggaataccgctttaacgacgcggcccggtcaggctataaa
tttctctggaatgaattttgtgactggtatctggagctgatcaagccggatctgcagtca
gacgacgcgacccgcgcgaatacagcgcggcatgtgctccagcttgccctgcgcgaagtg
cttgtcctgctgcaccccatcatgccctttgtgacggccgaaatctggcaggccctgccg
tccgccaccgacatgacggatacggccgcggcagagctggccgtgacgccctggccgccg
gcgcggccctgctgcgtgcgcgaaacagccgctcggcatatggagataattcaggaagtg
attgtggctgtacgcaccatgaaagccgaactcggcattaatcccccgcagaaagtcagt
ctgcttttacgccctgctgacgcggcgcaggccgccttgcttgaggaaaaccgcgaaatg
atcatgacgctggcccgtctgggatctctgaccaccgacgcggacgcggacgcgcccaag
gcttcggcatcttctgtggcgcagggctgccagattattatgccgctcaggggcgcggtg
gatattacaagcgaactggcgcggcttgataaggaacttacgaaaatggaaaaagacgtt
gcggccgtcaataagaaactgtgcaatgagagttttgtcagccgcgcgcctgccgatgtg
gtagccagcgaacaagaacgggccgcgcaccttttgaacgcaaaggccaaactgctggcc
ctgaaagaacggttcacgcaggcttcggctgataaggaaatttcccctgccgtgcaagat
aaaccgtga
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