Candidatus Desulfovibrio trichonymphae: RSDT_0180
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Entry
RSDT_0180 CDS
T05578
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RSDT_0180 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtr03021
]
RSDT_0180 (rpoZ)
03400 DNA repair and recombination proteins [BR:
dtr03400
]
RSDT_0180 (rpoZ)
Enzymes [BR:
dtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RSDT_0180 (rpoZ)
Transcription machinery [BR:
dtr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RSDT_0180 (rpoZ)
DNA repair and recombination proteins [BR:
dtr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RSDT_0180 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF1236
Motif
Other DBs
NCBI-ProteinID:
BAV91692
UniProt:
A0A1J1DV59
LinkDB
All DBs
Position
236610..236849
Genome browser
AA seq
79 aa
AA seq
DB search
MARITVEDCQKRVDNRFLLVQMAIKRVRQYREGYEPLIESRNKEAVTALREIAAGKVMPN
DMSLYVPLPEGIEAPSTED
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtattaccgtggaagattgccagaaacgcgtggacaaccgttttctgctggtg
cagatggccatcaaacgtgtgcgccagtaccgtgaaggttatgaaccgcttattgaatcg
cgcaacaaggaggctgtcaccgccctgcgtgaaatcgccgccggcaaggtgatgcccaac
gacatgagcctgtacgtacctctgccggaaggcattgaagccccgagtacggaagactga
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