Candidatus Desulfovibrio trichonymphae: RSDT_0209
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Entry
RSDT_0209 CDS
T05578
Symbol
dppD
Name
(GenBank) oligopeptide/dipeptide ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RSDT_0209 (dppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dtr02000
]
RSDT_0209 (dppD)
Transporters [BR:
dtr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RSDT_0209 (dppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_5
AAA
AAA_16
Mg_chelatase
AAA_7
AAA_25
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
BAV91721
UniProt:
A0A1J1DPF2
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All DBs
Position
272991..273950
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AA seq
319 aa
AA seq
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MEHLSVYFAHEGEPLAAVNNVDLALPPGAVTCLVGESGCGKSLTARAVLRLMPEKSAISG
RIFLGDTDILALSEIELRRFRGRRAAMVFQEPMTSLNPVLTVGEQAAEPLRLHFGMTRAQ
ARQETEDLFAEVGIPAPRSRYDDYPHQLSGGMRQRVMIAMALACRPELLLADEPTTALDA
TVQGQILRLFADQMREWGMTVLFITHDLGIVAQIADVVGVMYAGRLVEDAPAGEFFAAPR
HPYSRGLMRSAPGRQSMRLKRLPAIDGVVPALRDIPLGCPFQPRCAEALPRCSEAMPPLF
ADGSGRTACWRAEPSFSSR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagcatctttctgtgtatttcgcgcatgaaggagagcctctcgccgcggtcaacaat
gtggacctcgctcttccccccggcgccgtgacctgccttgtcggagaatccggctgcggc
aaaagtctcacagctcgcgccgttctgcgtctgatgcctgaaaagtcagcaatcagcggg
cgcatttttcttggagacacagacattctcgctctttcagaaatcgaattgcggcgtttt
agggggcgtcgggcagccatggtttttcaggaacccatgacgtcgctcaatcctgtattg
acagtgggcgaacaggcggcggagcccctgcggctgcacttcggcatgacccgcgcgcaa
gcccgtcaggagacggaagatctttttgccgaagttggcattcccgcgcctcggagccgt
tatgacgactatccccatcagctttccggcggcatgcggcagcgggttatgatcgctatg
gctcttgcgtgccggccggaactcctgctcgctgacgagcccacaacggctcttgacgcg
acagtacaggggcagattctgcggctttttgctgatcagatgcgggaatggggcatgact
gtgctttttatcacgcatgatctgggcattgtggcgcaaatcgcggacgttgtgggggtc
atgtacgcaggacggcttgtggaagacgcgcctgccggagagttttttgctgcgcctcgt
catccgtacagcagggggctcatgcgttcagcgccggggcgacagtccatgcgtctcaag
cgtctgcccgccattgacggtgtggttcctgccttgcgggatattcctctgggctgtcct
tttcagccgcgctgcgccgaagcgctgccccgctgcagtgaggcaatgccgccgctgttt
gccgacggcagcggtcggacggcctgctggcgggcggaaccctcattttcttcgcggtga
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