Candidatus Desulfovibrio trichonymphae: RSDT_0233
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Entry
RSDT_0233 CDS
T05578
Symbol
cooM
Name
(GenBank) H+-translocating [NiFe] hydrogenase complex, transmembrane subunit CooM
Organism
dtr
Candidatus Desulfovibrio trichonymphae
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Proton_antipo_M
Proton_antipo_N
Motif
Other DBs
NCBI-ProteinID:
BAV91745
UniProt:
A0A1J1DPH3
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All DBs
Position
complement(301172..304924)
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AA seq
1250 aa
AA seq
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MTSPLFTSDGYLWPLFAGTVLLLFATAQAVLQRGNPRRLILWGALHDLGIVCLGFSAPNA
TAYTGLWLFVIFQTTARALALVSLARLTPDTQDAPLLQNLRGSGYGNLNGALFALGLLGA
VGGSPFLIPEGRAMIVKGVLFTSTHGGIPALLVMAAATTVFVWLSVDAVRCVFLTPTTKE
QTAIAGSSSAAVALVIVFCLLVALLGFGREALTDIVGRRFALAPEHAPAHPAYCFLYAGA
IAAGLTSWLGSKKLAALVAIFFFAVAFAAAFKVDSPPIPRLFLLLITFIGFVVSVYSKDY
IHDEREGWYWFFLPLTFASLAGIVSAHSKDAFYGYWEMMTFASYFLVVYEGKRTAFDAGL
KYYVMCAGGALFMLPGLFLLEGLSGNAVNLAAVNPVWIQGALMLCLAGFAVKAGLVPLHS
WLPDAHPAAPSPVSAPLSGIITKMGIFGIVSVILAGADQTVGDMRGLFDLSWFGTTLVFM
GAATLIYGEIMALLQDDIKRMLAYSTLGQLGEITLVLGMDTWLATTGALWHVVNHAVMKD
LLFLGAGALIMRAGSRNLADMRGMGRQMPWTTACMAAGLVSIMGLPPFGAFYSKFLMIQA
SVNAGYIWMAALILAGSLVGAIYYMRILKTLIFDERPAHLPNVAEAPLYMRLPLAVLAAL
SLALCLVPQLPMHLVAGAASFCSEPTLTDIRVLDALAVPWPIYVTTPIFGALIPAFFSDN
RRKAGWSSVAVLLATALLVMAFGRGMDTLSFCFAMIVPIIGALNMAYAVGYMDHSHTQWR
FYGAFTCMCGALVGMAASRYMLSFFLFWEIMSSWTLYMAIAHEGTRPSLREACKYFIFNL
AGAGFLFVGICVVGPLTPFTAELLTGFAPALPQHAAWLGTALLATGFVLKAAQLPIRIDW
QMHPALAPTPVSGYISSVLLKSAIIGLIKLFALLGGSFVLAGVFPGYEKINLINLAVMWI
GAITIIYSAIRALQVNGLKLVFIYSTVSQLGYMVLAVGTGGALGYAGGMLHLINHVFFKD
LLFLVCGAVMFATHRESLEDLGGIGRKMPFTLLVFAIGGLSLVGVPPTSGFSSKWLIYHA
LMQAGQPLLALLSLVGSVITLAYVAKFLHSAFLGQPAPDLDNIKEAPRIMRLPMGILAFG
CVLTGVFPGLALKPINNILREYGSTPLDVNLAGVVSGPGAWNATAIFIMALLAFLAGWFF
VRRFTTLREIDVHTCGLPPKIAASRMGPSSIYGGLAPYINAKPAAEENRS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgacatcacctctgttcacgtccgacggatatctttggccgcttttcgccggcacggtt
cttttgctgtttgccacagctcaggctgttctgcagcgcggcaacccgcgtcgtctgatt
ttatggggcgccctgcacgatctgggcattgtctgtctggggttcagcgctcccaacgcc
acagcctataccggtctttggctttttgtcatttttcagacaacggcgcgcgcactggcc
cttgtttctcttgcccgactcacacctgacacgcaagatgcgccgctgctgcaaaatttg
cgcggctcagggtacggcaatcttaacggcgcgctctttgccctaggccttctgggtgcg
gtaggcggttcgcctttcctgattcccgaaggccgggccatgatcgtcaaaggcgtgctg
ttcacatcgacgcatggcggcattcccgccctgcttgtcatggccgccgcaacaacggtt
tttgtatggctttcagtagacgccgtgcgttgcgtcttcctcacgccgacgacgaaagaa
caaacagccatcgccggatcttcctctgcagccgtagcgctggtgattgttttttgtctg
cttgtcgctctgctcggtttcgggcgtgaggcgctgacggatattgtcggcagacggttc
gcgctcgcgccggaacatgcgcccgcgcacccggcctactgttttctctacgccggcgcc
atagcggcaggcctaacctcttggctcggcagcaaaaagctggccgcgctggtagccatc
ttttttttcgccgtggcttttgcggccgcattcaaggtagacagcccccccataccgcgc
ctttttctcttgttgatcacgtttataggatttgtcgtcagcgtctattccaaagactat
atccatgacgaacgcgaaggatggtactggtttttccttccgctgaccttcgcctccctt
gcaggcattgtgtccgcgcacagcaaggacgcgttctacggctactgggagatgatgacc
tttgcctcctattttcttgtagtgtatgaaggcaagcgcaccgcctttgacgccggcctc
aaatattacgtcatgtgcgccgggggcgcgctgtttatgctgcccgggctcttcctgctg
gaaggtctttccggaaatgccgtaaatcttgccgccgtaaatccggtttggattcaggga
gcgcttatgctctgccttgccggcttcgccgtcaaggccggtcttgttccgttgcactcg
tggctgcccgacgcccacccggcagcgccttctcccgtgtccgcgccgctctccggcatt
atcaccaagatgggtattttcggcatcgtcagcgtcatcctggcaggagcagatcagact
gtcggcgacatgcgcggcctgtttgatttgagctggttcggcaccactctggttttcatg
ggcgcggccacccttatctacggcgaaatcatggcattactccaggacgacataaaacgc
atgctggcctactccacactgggccagcttggcgaaatcacgcttgttctgggtatggac
acgtggcttgccacaacaggcgcgctctggcatgtcgtcaaccacgccgttatgaaagat
ttgctctttctcggcgcgggcgcgctcattatgcgcgcaggctcccgcaatctggccgac
atgcgcggcatgggacgccagatgccgtggacaacggcctgtatggccgcgggccttgtc
agcatcatgggactgccgccttttggggctttttacagcaaatttctgatgatacaggct
tctgtgaacgccggctacatatggatggcggctcttattctggccggttcgctcgtcggc
gccatttactatatgcgcattctcaaaaccctaatttttgacgaacggccagcacatttg
ccgaacgtcgcggaagcgcccctctacatgcgcctccccttggcggttctggccgcgctc
agtctggcgctttgccttgtgccgcaactgccgatgcacctcgttgccggcgccgcttcc
ttctgctctgaaccaacgctgaccgacatccgcgtcctggacgcgcttgccgtgccctgg
cccatctatgtgacaacgccgatattcggcgcgctcataccggcctttttttccgacaac
cgcagaaaagcgggctggtcgtccgtagcggtgctgctcgcaaccgctctgctggtaatg
gccttcggccgcggcatggatacactctcattctgctttgccatgatagtgccgatcatc
ggcgcgctgaacatggcttacgcagtgggctatatggatcacagccacacccagtggcgc
ttttacggggcatttacctgtatgtgcggcgcgctggtgggcatggctgccagccgttat
atgctgagctttttcctcttctgggaaatcatgagttcatggacgctctatatggctata
gcgcatgaggggacacggccatccctgcgtgaagcttgcaagtactttatcttcaatctg
gccggcgcgggctttttgtttgtcggcatctgcgttgtcggcccgctcacgccattcacg
gcagagctgctgactggctttgctcccgcattgccgcagcacgcggcatggctcggcaca
gcgctgttggctacgggttttgtgctcaaggccgcgcaactgcccatacgcattgactgg
cagatgcacccggcgctcgcgcccacgcccgtttccggctatatatcttcagtgctgctg
aaaagcgccattatcggtcttatcaaactctttgccctgctcggcggatcttttgtgctg
gccggcgtattccccggctacgaaaaaataaacctgatcaacctcgccgttatgtggata
ggcgcgatcaccattatatactccgccatacgcgctctgcaggtgaacggactcaagctc
gtcttcatctactcaacagtgagccagctcggttatatggttctggctgtgggcacaggc
ggcgcattggggtatgcgggcggcatgcttcacctcatcaaccacgttttcttcaaggat
ttgctcttccttgtctgcggcgccgtcatgtttgccacacacagggaaagccttgaggat
ctcggcggcataggacgaaaaatgccttttactctgcttgtcttcgccattggcggcctc
tcgcttgtgggcgtgccgccgacaagcggcttttcttccaaatggctcatctaccacgcg
ctgatgcaggcgggccagccccttctggcgctgctctcccttgtcggcagcgtgataacg
ctcgcttatgttgctaagttcctgcactcggcatttttgggacagccggcgccggatctt
gacaatattaaggaggcgccgcgcatcatgcgccttcccatgggcattctggctttcggc
tgcgtgctgaccggcgtcttccccgggcttgcgctcaagcccatcaacaacatcctgcgc
gaatacggttcaaccccgctcgacgtgaaccttgccggcgtggtttccggaccgggcgca
tggaacgccacagccatattcattatggcgcttctggcctttcttgctggctggttcttt
gtgcgacgctttaccacgttgcgcgaaattgacgtgcacacctgcggtctgccgccgaaa
atcgccgccagccgtatgggcccatccagcatctacggtggtctggcgccctatataaac
gcgaagcccgctgccgaggagaacaggtcatga
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