Candidatus Desulfovibrio trichonymphae: RSDT_0292
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Entry
RSDT_0292 CDS
T05578
Name
(GenBank) putative cell wall-associated hydrolase
KO
K19303
murein DD-endopeptidase [EC:3.4.-.-]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dtr01002
]
RSDT_0292
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dtr01011
]
RSDT_0292
Peptidases and inhibitors [BR:
dtr01002
]
Cysteine peptidases
Family C40
RSDT_0292
Peptidoglycan biosynthesis and degradation proteins [BR:
dtr01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
RSDT_0292
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
LRAT
CHAP
Motif
Other DBs
NCBI-ProteinID:
BAV91804
UniProt:
A0A1J1DVB4
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All DBs
Position
complement(384317..385210)
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AA seq
297 aa
AA seq
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MVKHLRVCALLMGMSFIFGCAAKQGSQQTDVRNAQFHHTYEASFDKNQPQASLRLLRKAQ
SAIGVPYVRGGITPGGFDCSGFVSWAYKSVGVALPRTAREQSGIGRQIGKTEDMRAGDIV
AFHHPRRGYHTGIYVGDGKFIHSPHRRTSVRITSLDDPYFNKNFLGARRVSFDGNENLMA
QAENRLNDYTEEKTLRDLTTNKKRDVKNRRDVKSGKPGKATQLAVNNRAGKNAEKGDRSP
VASSKKSASANVDTKSKPSKSRTATVERKKAKNSLADVGNGLKNITSQKIRQKAKKS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaacacctgagagtgtgtgcgctgttgatgggtatgagcttcattttcggctgt
gcggcaaaacagggttctcagcagacagacgtgcgcaacgcgcaattccaccatacttat
gaagcctccttcgacaagaaccagcctcaggccagccttcgtctgttgcgcaaagcgcag
tcggctatcggtgtgccctatgtgcgcggtggcatcaccccaggtggctttgactgctcg
ggctttgtcagctgggcatacaaaagcgtaggggtggctttaccccgcacagccagggaa
caatccggcataggccgacaaattgggaagactgaagatatgcgcgccggcgacatcgtc
gccttccaccatccgcgccgcggttaccataccggcatttatgtgggtgacggcaaattt
atacacagcccacaccgccgcacatccgtgcgcatcacttcgcttgacgacccttatttc
aacaaaaattttcttggtgcgcgacgcgtcagctttgacggcaatgaaaaccttatggca
caggcggaaaaccgcctcaacgattacacagaagaaaaaaccctgcgagacctgacgacc
aataaaaaacgcgacgtcaaaaaccggcgcgacgtcaagtccggcaaacccggcaaagcg
acacagcttgccgtgaacaacagggccggcaagaacgcggaaaaaggcgatcgttctcct
gtggcgtcgtctaaaaaatccgcatcagccaacgtcgatacaaaaagtaaaccctccaag
tcaagaaccgcgaccgtcgaacggaagaaagcaaaaaacagtctcgcggatgtcggcaac
ggactaaaaaacataacttcgcagaaaatcaggcagaaagcaaaaaaatcatag
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