Candidatus Desulfovibrio trichonymphae: RSDT_0343
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Entry
RSDT_0343 CDS
T05578
Symbol
xerC
Name
(GenBank) site-specific tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dtr03036
]
RSDT_0343 (xerC)
Chromosome and associated proteins [BR:
dtr03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RSDT_0343 (xerC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_2
Motif
Other DBs
NCBI-ProteinID:
BAV91855
UniProt:
A0A1J1DPT4
LinkDB
All DBs
Position
complement(439993..440976)
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AA seq
327 aa
AA seq
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MSPPEKAVSDSAKTKNADMLVKKFLDRLAVQKGYSLSTQMAYRADLAQLTAFLSERNTDI
AKPQTVSRKHIQAFLARLFRQGGAKSSMARKLAAVRSFFQFLLRNGLVAENVAKQVRNPR
QERRQPRVLNVDEAFALLDARKNTAETDSNDARLHLRDIALAELLYGSGLRISEALGLNL
DDARLKSGILRVLGKGSRERLAPLSDTSVAAMTTWLTVRGCLATPKENALFVGARGGRLH
RREAARVIARLCREAGLAFTVSPHSLRHSFATHLLAAGADLRSVQELLGHQRLTTTQRYT
EVSLEYLMRAYDMAHPRSNIHPTRENA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgcctgaaaaggctgtctctgacagtgcaaaaaccaaaaacgcggatatgttg
gtcaaaaaatttttggaccggcttgctgtgcagaaaggatattccctgtccacacaaatg
gcatatcgcgcggatttggcgcaactgactgcatttctctccgaacgcaatacagacatt
gcaaaaccgcaaaccgtcagccgcaaacatattcaggcttttttggcccggctcttccgg
cagggaggggcaaaaagttccatggccagaaaattggccgctgttcgttccttttttcag
tttctgctgcgcaatggtcttgtggcggagaatgttgcaaagcaggtgcgtaatccgcgg
caggaaagacgccaaccccgcgtgctgaatgtggatgaagcattcgcgctgcttgatgcc
cgcaaaaacacggcggaaaccgacagcaatgacgcgcggctgcatctgagggatatcgcc
ctggctgaactactttatggttccggattgcgcatttcagaggcacttggtctgaatctg
gatgacgcccgacttaaatcgggcatactgcgtgttctgggcaaaggctcccgcgaacgc
cttgctcctctgtccgacacgtccgtcgcggccatgacgacatggcttaccgtgcgcggt
tgtctggcgacgccaaaggaaaacgcgctttttgtgggcgcgcgcggggggcgtcttcat
cgccgggaggctgcacgggtcattgcccgtctttgccgtgaggctggactggcttttacc
gtttcgccgcacagtttgcggcattcctttgcgacgcacctgctggccgctggggccgat
ctgcgcagcgtgcaggaacttctggggcatcagcgtctgacgacgacacagcgttacaca
gaggtcagcctggaatatctgatgcgcgcctatgatatggcccatccccgttcaaacata
cacccgacacgggaaaacgcgtaa
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