Candidatus Desulfovibrio trichonymphae: RSDT_0349
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Entry
RSDT_0349 CDS
T05578
Symbol
murC
Name
(GenBank) UDP-N-acetylmuramate-L-alanine ligase
KO
K01924
UDP-N-acetylmuramate--alanine ligase [EC:
6.3.2.8
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00550
Peptidoglycan biosynthesis
dtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RSDT_0349 (murC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dtr01011
]
RSDT_0349 (murC)
Enzymes [BR:
dtr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.8 UDP-N-acetylmuramate---L-alanine ligase
RSDT_0349 (murC)
Peptidoglycan biosynthesis and degradation proteins [BR:
dtr01011
]
Precursor biosynthesis
Amino acid ligase
RSDT_0349 (murC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
BAV91861
UniProt:
A0A1J1DT65
LinkDB
All DBs
Position
complement(450618..451991)
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AA seq
457 aa
AA seq
DB search
MKNKIRHIHMVGIGGAGMSGIAEVLLSLGYEISGSDLSDSAIVRHLREMGARVAVGHAAE
NVGDVQVLVKSTAVNADNPEVEEARRRNIAIIPRAEMLAELMRLRQGVAIAGTHGKTTTT
SLTAAIFDAAGFDPTVIIGGRLNVYGANAHLGRGDYLIAEADESDGSFLCLLPIINVVTN
VDEDHLDYYRTREAIDAAFVQFMNNVPFYGVNVVCGDDTGVRALLPRVKRPVLTYGFAQE
NRLRAVLLSSGLPSRFEVWHGHEKLGDVTLPQPGRHNILNALGAICAAMEAGISFSACVD
GLQAFSGVGRRFEFKGEKNGVAVVDDYGHHPAEIAATLTTARQVYPGRRIVVAFQPHRFS
RTQAQFGEFCKVFDAADCLLLTEIYAASEKPIPGVSGQSLAQGVQQVSSTPVIYFQTLDA
LAANLPACLRSGDVLLTLGAGTITRLGPLFLDAADNA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaaattcgacatatccacatggtgggcatcggcggcgccggcatgagcggc
attgccgaagttctgttgagtcttggctatgaaatttccggttcagacctgagcgattca
gcgatagtcaggcatttgcgcgagatgggagcgcgtgtggcggtaggccatgccgctgaa
aatgtcggggacgtgcaggtgcttgtcaaatcgaccgctgtcaatgccgacaaccctgaa
gtggaggaagcccgccggcggaatatagcgattattccccgcgccgaaatgctcgccgaa
ctcatgcgactgcgccagggcgtcgccatagcgggcacgcacggcaaaacaacgacaacg
tcgttaacagccgccatttttgacgctgccggctttgatccgactgttattatcggcggg
cgccttaatgtttacggcgcaaacgcccatttgggacgaggcgattaccttatagcggaa
gctgatgaatctgacggttcttttctctgtcttttgcccattattaatgtggtaaccaat
gtggatgaggatcatcttgactattacagaactcgggaggccattgacgcggcttttgtg
cagtttatgaataacgtgccgttttacggcgtcaatgtggtctgcggggacgacacaggc
gttcgtgcgcttttgcctcgcgtcaaacggccggttttgacttacggttttgcgcaggag
aaccggctgcgcgcggtgctgctttcaagtggtctgccaagccgttttgaggtctggcat
ggacatgaaaaactgggagacgtcactctgccccagcccggacggcacaatattttgaac
gcgctcggcgccatctgcgccgctatggaggcgggcatcagtttttccgcatgtgttgac
ggcttgcaggctttcagcggggtgggcaggcgctttgagtttaaaggcgagaagaacggc
gtggcagtggtggatgattatggccaccaccccgcagagatagctgccacgctgacaacg
gcccgtcaggtttacccggggcggcgtattgtcgtcgcatttcaaccgcatagattcagt
cgcacacaggcgcagttcggcgaattttgcaaggtctttgacgccgccgactgtcttctt
ttaacggaaatctatgcggcctcggaaaagccgattcccggagtttcagggcaaagcctc
gcccagggcgtacagcaggtttcaagcacgcccgtcatttattttcagacacttgatgca
ctggcggcaaacctgccggcctgtcttcgttcgggggacgttttgctgacgcttggcgcg
ggcaccatcacgcggctcggtccgctctttcttgatgctgcagacaatgcttga
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