Candidatus Desulfovibrio trichonymphae: RSDT_0354
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Entry
RSDT_0354 CDS
T05578
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00300
Lysine biosynthesis
dtr00550
Peptidoglycan biosynthesis
dtr01100
Metabolic pathways
dtr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RSDT_0354 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RSDT_0354 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RSDT_0354 (murF)
Enzymes [BR:
dtr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
RSDT_0354 (murF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BAV91866
UniProt:
A0A1J1DPV7
LinkDB
All DBs
Position
complement(456665..458125)
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AA seq
486 aa
AA seq
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MRLNYNEIAGRLSLKLLPDDKMLTSVATDSREVVPGALFVCLPGGRVDGHNFAARAEDMG
AGAILASRALPDARVPVLYVADTVKALGQIAACWREATKARVVGITGTAGKTTLKEILAQ
VLAVRGKTACNTMNHNNQIGMPCSMLAADGDEDFWVMEAGISREGDMEELASMLRPDLGL
ILNTGAGHTEGLAKKGVASHKAQLLQYIAPGGFGLVSADYPDLVHEAGATGALLRFFSAE
GNPAEYLACYNGPEPASDGDGRIPRGRYRLCLDGVWCDIVAPFCGNFGAENSIAAAAAAH
LLGLSTEEIAEGFARAQLPAQRFYIKRLGRWDIIDDTYNANPLSMRRMLDAAAELAQHKD
FVPVLGAMLELGDIAANEHEKLGRYLAALNPAAVLWKGAYAERVHAGLREGGYNGPWFVV
REREDFLPVFAELRRVQRLARDHDGLVLFKGSRGNRLEELCADLCGQLAGGKASMGAQAW
EHKHVL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
ttgcggttaaattataatgaaatagccgggcgtctgtcgctcaagctcctgccggacgac
aagatgttgacgtctgtcgccacagacagtagggaggttgtccccggggctctttttgtc
tgtctgcccggaggtcgcgttgacggacataattttgcggcccgtgcggaagatatgggc
gcgggagctattctggcctcgcgcgcgcttccggacgcgcgtgtccctgtcttgtatgtt
gccgacacggtaaaggccctagggcaaattgccgcttgctggcgtgaggccacaaaagcc
agggtagtgggtattaccggcacggcaggcaagacgacgctcaaagaaattttggctcaa
gtgctggcagtgcggggaaagacagcgtgcaacaccatgaatcacaataatcagataggc
atgccttgctccatgctggccgcggacggggacgaagatttttgggttatggaggcggga
atcagcagagaaggagatatggaggagcttgcttctatgctgcgtccggatctggggctg
attctcaacacgggcgcagggcatacggaagggcttgccaaaaaaggcgttgcctcacac
aaggcgcaattgcttcagtatattgcaccgggtggctttgggcttgtcagcgcggattat
cccgatcttgtgcatgaagccggcgccacaggagccctgttgcgatttttcagtgcggaa
ggcaaccccgctgaatatctggcctgttacaatgggccggagcccgcatcagacggcgat
ggccgtattccgcgtgggcgttatcgcctttgtctggacggcgtatggtgcgatatcgtt
gccccgttttgcggaaatttcggcgcggaaaacagcattgccgcagccgcagccgcgcat
ttgctcggcctgtccaccgaggaaatagcggagggttttgcgcgggcgcaattgcctgcg
cagcggttttatataaaacgtctcgggcgatgggatataattgatgacacctataacgca
aatcctctgtctatgcggcgtatgctggacgccgccgccgaactggcccaacataaggat
tttgtgccagttcttggtgcaatgctggaactcggagatatagcggcaaacgaacacgag
aaactggggcgttatctggcggcgcttaaccctgccgcggttctttggaaaggtgcttac
gctgaacgcgtgcatgcgggattgagggaaggcggttacaatggtccctggtttgtcgtc
agggagcgtgaagattttctgccggtctttgccgagctgcggcgtgtacagcgtcttgcc
cgtgatcacgacggacttgttctttttaaggggtcacgcggcaacagactggaagaactg
tgcgcggacctgtgcgggcaactcgccggcgggaaggcgtctatgggggcacaggcctgg
gaacacaagcatgttttataa
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