Candidatus Desulfovibrio trichonymphae: RSDT_0383
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Entry
RSDT_0383 CDS
T05578
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
RSDT_0383 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
dtr03011
]
RSDT_0383 (rpsA)
Ribosome [BR:
dtr03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
RSDT_0383 (rpsA)
Bacteria
RSDT_0383 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
DUF7823
Motif
Other DBs
NCBI-ProteinID:
BAV91895
UniProt:
A0A1J1DPX1
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Position
complement(506670..508382)
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AA seq
570 aa
AA seq
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MTNPETGHDNEMNFESALENYLNPDFGNLEEGSIVKGEIVRVNDDNVLVDVNFKSEGLIP
AAEFRDAAGNMTVKLGDRMDVYVQRKNEMDGTITLSFEKAKRMQIFDQLEDVQENNKVVK
GHIMRRIKGGYTVDIDGVEAFLPGSHVDLRPVPDMDALVNQEFEFRVLKINRRRSNVIVS
RRVLLEEERDSKRQDLLRTLEEGQTVSGRAKNITEYGVFVDLGGLDGLLHITDMSWKRIR
HPKEMITMGQDLTLKVLSFNRDNNKVSLGLKQLVPDPWQDISARFPDGNHCTGKVTNLVD
YGAFVELEPGVEGLVHISEMSWTRKLRHPSQMVHTGDEVDVVILSVDGDKKRISLGMKQA
RPNPWEVVAEKYPEGTVLEGEIKNITEFGMFIGIEDGIDGLIHVSDISWTKKVRHPNEMY
NVGGMVQAKVLTVDQENEKFTLGVKQLVDDPWGHVPNTYPVGCSVKGVVTNVTDFGLFVE
VEEGIEGLVHVSELSNKKVKTSTEIYKEGQEIQAKVIYVSAEERRLGLSIKQIKDEEERR
KPKEFYTGSQESGQNLGDLLKQKLEESETN
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatccagaaaccgggcacgacaatgaaatgaattttgagagcgccctcgagaac
tatctcaaccctgatttcggcaatcttgaggaaggctcaattgtgaaaggcgaaatcgtt
cgcgttaacgacgacaatgtgcttgttgacgtgaacttcaagtctgaagggctgattccc
gccgcggaatttcgcgacgcggcaggcaatatgaccgtcaagctgggcgacaggatggat
gtgtacgtgcagcgcaaaaacgaaatggacggtaccatcaccctttcctttgaaaaggcc
aaacgcatgcagatctttgatcagcttgaagatgtgcaggaaaacaacaaggttgtcaaa
ggacatattatgcgccgcataaagggcggctacacggttgacattgacggcgtggaagcc
tttttgcccggttcgcatgttgatttgcgccctgttcctgatatggacgctctggtcaac
caggaatttgagttccgtgtgcttaaaatcaaccgtcgccgcagcaatgtgattgtttcc
cggcgtgttctgctggaagaagagcgggattcaaagcggcaagatttgctgcgcaccttg
gaagagggccagactgtcagcggcagggcgaagaatatcacagaatatggcgtgtttgta
gacctcggcggtctggatggcctgctgcatattacggatatgagctggaagcgcatacgc
catcccaaggaaatgatcaccatgggccaggatttgaccctgaaagtgctttcctttaac
cgtgataacaacaaggtttctcttggtctcaaacaactggtgcctgatccgtggcaggat
atttccgctcgtttccccgatgggaatcactgtacaggcaaagtcaccaaccttgttgac
tatggagcctttgtggagctggagcccggcgtggaaggccttgttcacatttctgaaatg
tcatggacgcgcaaactgcggcatccttcccagatggtgcacaccggggacgaggtggac
gtggtgattcttagcgtggacggcgacaagaagcgcatcagcctcggcatgaagcaggcg
cgtcccaacccatgggaagtggttgccgagaaatatcccgaaggcaccgtgcttgagggc
gagatcaagaacattacggaattcggcatgttcatcggcattgaagacggcattgacggc
cttattcacgtttctgacatttcctggacaaaaaaagtgcgtcatccgaacgagatgtac
aatgtcggcggcatggtgcaggcaaaagtgctcaccgtggatcaggaaaacgaaaaattt
accttgggtgtcaagcagcttgtggacgatccctggggtcatgttcctaacacatacccc
gtgggttgctctgtgaagggcgttgtgaccaatgtgacggatttcggtctgtttgtggaa
gtggaggaaggcatagaaggccttgtgcacgtctctgaactgtccaacaaaaaagtcaag
acttccacggaaatatacaaggaaggccaggaaattcaggcaaaggttatctatgtcagc
gctgaggagcgccggctgggtctgtctatcaagcagatcaaggatgaagaagagcgccgt
aagcccaaagaattttacacaggttcgcaggaaagcgggcagaacctgggcgatttgctg
aaacagaaactggaagaaagcgaaactaactga
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