KEGG   Candidatus Desulfovibrio trichonymphae: RSDT_0401
Entry
RSDT_0401         CDS       T05578                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
dtr  Candidatus Desulfovibrio trichonymphae
Pathway
dtr00300  Lysine biosynthesis
dtr00470  D-Amino acid metabolism
dtr01100  Metabolic pathways
dtr01110  Biosynthesis of secondary metabolites
dtr01120  Microbial metabolism in diverse environments
dtr01230  Biosynthesis of amino acids
Module
dtr_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:dtr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RSDT_0401 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RSDT_0401 (dapF)
Enzymes [BR:dtr01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     RSDT_0401 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF AAA
Other DBs
NCBI-ProteinID: BAV91913
UniProt: A0A1J1DPZ7
LinkDB
Position
complement(533269..534135)
AA seq 288 aa
MQNKLRFAKMQGVGNDYVYVNCFEERVEKPSELAPRICDRHFGVGSDGVVLIMPSGTADV
RMRMFNADGSEAEMCGNAIRCVGKYARDHGIVVKDVIRVETAAGIKTVRLLTEAGQVCGA
TVDIGEPVLVAERIPVLMPPAADNPAEKRIIARPMKVDGRVYNITAVSMGNPHAVVFMDN
IDNLALQRLGPCFERHEFFPQRINTEFVEVLSSGKIRMRVWERGAGETLACGTGACAAAV
AGALNGLTGREMDVHLTGGVLHVSWDESDGHVYMTGDAVSVFDGVYCM
NT seq 867 nt   +upstreamnt  +downstreamnt
atgcagaataaattgcgttttgccaagatgcagggcgtcggcaacgattatgtgtatgtg
aattgttttgaagaacgggtggaaaagccctccgagcttgcgcccagaatatgcgaccgg
catttcggcgtgggatcggacggggtcgtgctgattatgccgtcaggcacggcggacgtg
cgcatgcgcatgttcaacgccgacggctctgaagcggaaatgtgcggcaacgccatacgc
tgtgtgggcaagtacgcgcgcgatcacggcattgtcgtgaaggatgtgatcagggtggaa
acggcggcgggcataaagactgtgcgactgctcacagaagccggtcaggtgtgcggcgcc
acagtggacataggcgagcctgtgcttgtcgccgagcgcattcctgtactcatgccgccg
gcggcggataaccccgcggaaaagcgcattatcgcccgcccgatgaaagttgacggccgt
gtatacaacatcaccgcggtttccatgggcaacccgcatgccgttgtgtttatggacaat
attgacaatcttgccctgcagcggcttggcccctgctttgagcgtcatgaattttttccg
cagcgcatcaacacggaatttgtggaagtgctctcgtcaggcaaaatacgcatgcgcgtg
tgggagcgcggcgccggtgaaaccctggcatgcggcacaggcgcctgtgccgcggctgtg
gcaggcgcgttgaacgggcttacaggccgtgaaatggatgttcatctcacgggcggcgtg
ctgcacgtcagctgggatgaaagcgacgggcatgtctatatgacaggcgacgcggtgagt
gtttttgacggcgtttattgcatgtga

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