Candidatus Desulfovibrio trichonymphae: RSDT_0475
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Entry
RSDT_0475 CDS
T05578
Symbol
miaB
Name
(GenBank) tRNA-i(6)A37 methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dtr03016
]
RSDT_0475 (miaB)
Enzymes [BR:
dtr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RSDT_0475 (miaB)
Transfer RNA biogenesis [BR:
dtr03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RSDT_0475 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
BAV91987
UniProt:
A0A1J1E298
LinkDB
All DBs
Position
628820..630169
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AA seq
449 aa
AA seq
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MIEKSFHIITFGCQMNANDSHWLARRLVARGFVEAPLETARAVLLNTCSVREKPEHKVAA
TLERVRSLTGGNPDVLVGVLGCVAQQYGSTFFTAQSQVRLIAGSDGISGAPEAVERLLAE
PGLRLSLLDFTSRYIEREPVHGGASAPVAYVNIMQGCDNFCAYCIVPFTRGRQKSRCAAP
ILDECRARLDEGTRELVLLGQNVNAFGRDKSGDGTPFAALLARVAALPGIKRLRYLTSHP
KDMRPEDVAAFAVLTPLCPHLHLPLQSGSDTILARMGRKYNSRDFLNIVASLHAARPDMT
LSTDIIVGFPGENEDDFQATLAMMDACNFISSFSFCYSDRPGARAALFPNKTAPEIKRDR
LLRLQAMQENLSRRWLQGRIGEETCLLVEGKSRRQTVSGQTSWQGRDPYGALVHVALPAG
ADHTGRMAPVRITEAKNRTLTGRLAGDLW
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaaaaaagctttcatatcataaccttcgggtgccagatgaacgcgaacgactca
cactggctcgcgcgccgtctcgttgcgcgcggttttgtggaagcaccgctggaaaccgcg
cgggcagtgctgctcaacacctgctctgtgcgcgaaaaaccggaacacaaagtcgccgcc
acgcttgaacgtgtgcgcagcctcacaggcggcaacccggacgttctggtgggggtgctt
ggctgtgtggcccagcaatatggctcaactttttttaccgcgcaaagtcaagtgcgcctt
atagcgggcagcgacggcataagcggcgcgccggaggctgttgaacgcctgctggcagag
cccggtctgcgtctttcactgcttgatttcacaagccgctatatcgaacgcgaaccggtg
cacggcggcgcgtccgctccggtcgcatatgtgaacatcatgcagggctgcgacaatttt
tgcgcctactgcatcgtgccgtttacccgcggacgccagaaatcgcgctgcgccgcgccc
atacttgacgaatgccgggcgcggcttgacgaaggaacgagagaacttgtgcttttgggg
cagaacgtcaacgcgttcgggcgggacaaaagcggcgacggcaccccatttgccgcgctg
ctcgcgcgggtggctgcgctgcccggcatcaaacgcttgcgctacctgacctctcacccc
aaagatatgcggccggaagacgtggcggccttcgcagttctgacgccgctgtgcccgcat
ctgcatttgccgctgcagtccggttcagacacgattctcgcgcgtatgggacgcaaatac
aacagccgtgacttcctcaacatcgttgcctcattacatgctgcacgtccggacatgacg
ctttccacagatattattgtgggttttcccggcgagaatgaagacgattttcaggccacg
ctcgccatgatggatgcctgtaacttcatctcctctttttccttctgctattcagatcgc
cccggcgcgcgggcagcgcttttcccgaacaaaactgcgcctgaaatcaagcgggaccga
ctgctgcgtctgcaggccatgcaggaaaacctgagccgccgctggctgcagggacgtatc
ggcgaagaaacatgcctgcttgtcgaagggaaaagccgcagacaaaccgtatccgggcaa
acaagctggcaagggcgtgacccttacggcgcgctggtgcacgttgccctgcccgcaggc
gcggaccatacagggcgcatggcgcccgtgcggataacggaggcgaagaatcgcaccctc
acaggccgtctggcgggtgatttatggtag
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