Candidatus Desulfovibrio trichonymphae: RSDT_0483
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Entry
RSDT_0483 CDS
T05578
Symbol
rfbG
Name
(GenBank) CDP-glucose 4,6-dehydratase
KO
K01709
CDP-glucose 4,6-dehydratase [EC:
4.2.1.45
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00541
Biosynthesis of various nucleotide sugars
dtr01100
Metabolic pathways
dtr01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RSDT_0483 (rfbG)
Enzymes [BR:
dtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.45 CDP-glucose 4,6-dehydratase
RSDT_0483 (rfbG)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
BAV91995
UniProt:
A0A1J1E2A6
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All DBs
Position
640378..641490
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AA seq
370 aa
AA seq
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MFADVYNGRRVFITGHTGFKGSWLAAWLVRLGAAVGGYADSVPTEPSHFAAMGIGEHIED
MRGDVRDRETLAQTMCNFRPEVVFHLAAQALVRKSYEAPAETFETNMLGTLNVLEAARRC
PSLRALVLITSDKCYRNDELVWGYRETDHLGGGDPYSASKGCAEIIAHSYFQSFFQKGPA
CATTRAGNVIGGGDWALDRIVPDCARAWAAGQPAVIRSPAATRPWQLVLEPLSGYLWLGA
RLLDNHGNPSTVHGQAYNFGPAADVNNTVNEVAQALKRHWPGFAVQMDATGQTGGRECSL
LKLCCDKALAHLNWKATLGFEETVRHTAEWYQYFYRGEGGKKPRNMLDFTLGQIAAYVSA
AEQCGQIWTQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgacgtgtataacgggcgccgcgtttttataaccggtcacacgggttttaaa
ggttcctggctggcggcatggcttgtccgcctgggagccgccgtgggcggctatgccgac
tccgtccccacggaaccttcccattttgcggccatgggcatcggcgaacatattgaagac
atgcgcggcgacgtccgcgaccgggaaacactcgcccagaccatgtgcaacttcaggccg
gaagttgtctttcatctggccgcacaagcgctggtacgcaaatcttacgaggctccggca
gagacctttgaaacaaacatgctcggcacgctcaatgttctggaagccgcgcgccgctgc
ccctcattacgggcacttgtgctgatcacgtcagacaaatgttaccgcaatgacgaattg
gtctggggttacagggaaacagatcatctgggcggcggagacccttattccgcctccaag
ggctgcgccgaaatcattgcccattcctattttcaaagttttttccaaaaaggcccggcc
tgcgccaccacccgcgcgggcaacgtgataggcggcggagactgggcgttggaccgcatt
gttccggactgcgcgcgggcatgggccgccggtcaacccgccgtcatacgcagccccgcg
gcaacccgcccatggcaactcgtgctggaaccgctttccggctatttgtggcttggagcg
cgcctgcttgacaatcacggcaatccttccacggtgcacggacaggcatacaacttcggc
ccggcggcagacgtgaacaacacggtgaacgaagtcgcacaggcgcttaaacgccattgg
cccggctttgccgtacagatggacgccacagggcagaccggcggcagagaatgcagcctg
ctcaaactctgctgcgacaaggcgctcgcacacctcaactggaaggccacgctcggcttt
gaagaaaccgtccgccacactgcggagtggtatcagtatttttacagaggcgaggggggc
aaaaagccgcggaacatgctggacttcaccctcggacagatagcggcctacgtcagcgcc
gcggaacagtgcggccagatatggacgcagtga
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