Candidatus Desulfovibrio trichonymphae: RSDT_0555
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Entry
RSDT_0555 CDS
T05578
Symbol
serS
Name
(GenBank) seryl-tRNA synthase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RSDT_0555 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dtr01007
]
RSDT_0555 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dtr03016
]
RSDT_0555 (serS)
Enzymes [BR:
dtr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
RSDT_0555 (serS)
Amino acid related enzymes [BR:
dtr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RSDT_0555 (serS)
Transfer RNA biogenesis [BR:
dtr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RSDT_0555 (serS)
Prokaryotic type
RSDT_0555 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
BAV92067
UniProt:
A0A1J1E2H3
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All DBs
Position
729535..730806
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AA seq
423 aa
AA seq
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MIDLKLVQKQPEVLAKALADRHSAIHVSEFLALDARRRSLLAEVEALKNRRNTTSAELAV
LKRAGQDISAMQTELGGLSDRIKALDVETARAKADVEAWLLRVPNIPAISVPAGCDESEN
VELRRWARPRDFDFPVREHGDLGARLGGFDFERAGRITGSRFVFFFAWAARLERALVNFF
LDQHARCGYIEICPPLMVNRASMTGTGQLPKFEEDLFALRDRDYYLIPTAEVPLTNLHSG
ESLDEADLPCAYCAATPCFRSEAGAAGKDTRGIIRMHQFAKVEMVRFAHPDDSFNQLEIM
LGHACALLELLELPYRVVTLCTGDMGFSAAKTYDVEVWLPAQSVYREISSCSNCTDFQAR
RADIRFKPKGGKAAFVHTLNGSGLPAGRAMAAILENGQQRDGSVRLPEILVPYMGGVECI
EPL
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgattgatctcaagcttgtgcaaaaacagccggaagtgctggcaaaagctctggctgac
cggcattctgccattcatgtaagtgaatttcttgcgctggacgcccgtcgccgttctctg
ctcgccgaggtagaggctttgaaaaacaggcgcaataccacatctgccgagcttgccgtc
ctcaagcgcgcagggcaggatatttcggccatgcagacggagcttggcgggctttctgac
cgcatcaaggcgctggatgttgaaactgcgcgggccaaagccgatgttgaggcctggctt
ttgcgcgtgcccaatattccggctatctccgtgccggccggttgtgacgaatcggaaaat
gtggaactgcgccgatgggcgcgcccgcgtgattttgatttcccggtcagggaacacggt
gatctgggcgcgcgccttggcggttttgattttgagcgggcagggcggatcaccggcagc
cgttttgtattttttttcgcttgggcagcgcgtcttgagcgggcgctcgttaattttttt
ctggatcagcacgcgcgctgcggttatattgagatatgccctccccttatggttaatcgt
gcttccatgacaggcacaggccagttgcccaaatttgaggaagacctttttgcgttgcgc
gacagggattattatctaattcccaccgcagaagtgccgctgacaaatttgcactccggc
gaaagccttgacgaggcggacctgccgtgcgcctactgcgcggccacgccttgttttcgt
tccgaagcaggcgcggcgggcaaggacacgagaggcattatacggatgcaccagttcgcc
aaggttgagatggtgcgctttgcccaccctgacgacagcttcaatcaacttgaaatcatg
ctcggccacgcatgcgcgctgctggaacttctggaactgccctacagggttgtcacgctc
tgcaccggagatatgggcttcagcgccgcaaaaacgtatgatgtggaagtatggctgccc
gcgcagagcgtgtaccgtgaaatatcctcctgttccaactgcacggattttcaggccaga
cgggctgacatacgtttcaagcccaaaggcggcaaagccgcttttgtccatacgcttaac
ggttccggcctgcccgctggacgcgccatggccgctattctggaaaacggccagcaaaga
gacggcagcgtgcgtctgcccgaaattctcgttccctatatgggcggcgtggaatgcatt
gaaccgctgtaa
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