Candidatus Desulfovibrio trichonymphae: RSDT_0566
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Entry
RSDT_0566 CDS
T05578
Symbol
hdrB
Name
(GenBank) heterodisulfide reductase subunit B
KO
K03389
heterodisulfide reductase subunit B2 [EC:
1.8.7.3
1.8.98.4
1.8.98.5
1.8.98.6
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00680
Methane metabolism
dtr01100
Metabolic pathways
dtr01120
Microbial metabolism in diverse environments
dtr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
RSDT_0566 (hdrB)
Enzymes [BR:
dtr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.7 With an iron-sulfur protein as acceptor
1.8.7.3 ferredoxin:CoB-CoM heterodisulfide reductase
RSDT_0566 (hdrB)
1.8.98 With other, known, physiological acceptors
1.8.98.4 coenzyme F420:CoB-CoM heterodisulfide,ferredoxin reductase
RSDT_0566 (hdrB)
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
RSDT_0566 (hdrB)
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
RSDT_0566 (hdrB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCG
Prok-RING_4
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BAV92078
UniProt:
A0A1J1DYA6
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All DBs
Position
748281..749165
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AA seq
294 aa
AA seq
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MTYAYYPGCSAKGSSADYEKSTQAVCDVLGLTLVEMSDWNCCGSTPAHAVDTELSAALCA
RNLDIAARQGAKMLLTPCPSCLSNLKHAANRLEKPEFRARVDALLDNPAAGNFPAVTSVM
QGIAAHCDVNGIAKHIRKNLKGLKLAAYYGCLMSRPAKLMDFGDPENPSLMENLLTACGA
EMLNFPLKTVCCGASYGIPERAVTARLSGRILKLAACMQADAVAVACPLCQMNLDLRQPQ
AAKAVDAFFNMPVLYFTQIMGLAFGLSPTALGLEKLRVSADSLLRKLEAEGGRS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgacatatgcctactatcccggttgctcggccaagggctcgtcagcggactacgaaaaa
tccacgcaggccgtgtgcgatgttcttggcttgactcttgttgaaatgtcggactggaac
tgctgcggttcaacgccggcccatgctgtcgacacggaactgtcagccgcgctttgcgcc
cgcaatctggacatcgctgcgcggcagggggcgaaaatgctgctgacgccctgtccgagc
tgtctttccaacctgaagcacgcggcaaatcgcttggaaaaacctgaatttcgcgcccgt
gttgacgcgctgctggacaaccccgcagccggcaatttccctgccgtcacatctgtcatg
cagggcatagccgcgcactgtgatgtaaacggcattgcaaaacacattcgtaaaaacctc
aagggactgaagctggccgcctattacggctgtctgatgagccgccctgccaagctcatg
gatttcggcgacccggaaaacccgtctctcatggagaacctgcttacggcatgtggcgcg
gaaatgttaaattttccactcaaaacagtctgttgcggcgcatcgtacggcatacctgaa
cgggctgtgacggcacgcctttccggccgtattctcaagctcgccgcctgtatgcaggct
gacgccgtcgctgtggcttgtccgctctgccagatgaatctggatctgcgccagccgcag
gccgcaaaggctgtcgatgccttcttcaacatgcccgtactctattttacacagataatg
ggcctcgcgttcggcctgtcccctacggcgctcggtctggaaaaactccgcgtcagcgct
gacagcctgctgcgcaaacttgaggctgaaggaggcagatcatga
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