Candidatus Desulfovibrio trichonymphae: RSDT_0567
Help
Entry
RSDT_0567 CDS
T05578
Symbol
hdrA
Name
(GenBank) heterodisulfide reductase subunit A
KO
K03388
heterodisulfide reductase subunit A2 [EC:
1.8.7.3
1.8.98.4
1.8.98.5
1.8.98.6
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00680
Methane metabolism
dtr01100
Metabolic pathways
dtr01120
Microbial metabolism in diverse environments
dtr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
RSDT_0567 (hdrA)
Enzymes [BR:
dtr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.7 With an iron-sulfur protein as acceptor
1.8.7.3 ferredoxin:CoB-CoM heterodisulfide reductase
RSDT_0567 (hdrA)
1.8.98 With other, known, physiological acceptors
1.8.98.4 coenzyme F420:CoB-CoM heterodisulfide,ferredoxin reductase
RSDT_0567 (hdrA)
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
RSDT_0567 (hdrA)
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
RSDT_0567 (hdrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4
Fer4_6
Fer4_21
Fer4_7
Fer4_16
Pyr_redox_2
Fer4_10
Fer4_9
Fer4_2
FAD_oxidored
DAO
Fer4_22
GIDA
Fer4_4
FAD_binding_2
NAD_binding_8
HI0933_like
Fer4_17
Fer4_8
Pyr_redox_3
NAD_binding_9
Fer4_3
Trp_halogenase
AlaDh_PNT_C
Thi4
Fer4_15
Pyr_redox
FAD_binding_3
FMO-like
Motif
Other DBs
NCBI-ProteinID:
BAV92079
UniProt:
A0A1J1DQH9
LinkDB
All DBs
Position
749162..751123
Genome browser
AA seq
653 aa
AA seq
DB search
MRIGVFICHCGSNIAGTVDCARVAEISTGFPDVVYATDPMYTCAEPGQVAIEAAIHDHRL
DGVVVASCSPRIHEPTFRHTVERAGLNRYMFEMANIREHVSWIGKDRDANTNKAAELVKM
ALAKLRNNRPLVAKSFEANKKVLIVGGGVAGIQAALDCADGGVPVILLERESTIGGKMAK
LDKTFPTVDCSACILGPKMVDVAQHPNITLYTYSELEDISGYIGNFTVKIHKRATYVNWE
KCTGCGVCSEKCPSKKTPDAFNELTGVTTAINIPFPQAIPKKAVISAEHCRQLTKGKCGI
CAKTCPTGAVVYDMQDDVVTEEVGCIIAATGYDLMDWTVYREYGGGQYPDVITSLQYERL
LSTSGPTGGHIRRPSDGLEPKHVVFIQCVGSRDKSVGRPYCSGFCCMYTAKQAVLTKDHL
PLSQSYVFYMDIRAPGKLYDEFTRRAVEEYGVEYIRGRVSAVYPDGEGAYVVMGVDTLLG
RPVEIKADIVVLAVGIEASRGAAALAEKLRISYDNYGFFMESHVKLKPVETNTAGVFLAG
VCQGAKDIPASVAQGSATAAKVLALFARDRLENDPQTAQVDTRRCVGCGKCIRCCPFGAL
KETTIRGEIKTDVIETVCQGCGLCTSTCPQGAVQLSHATDNQILAEVNALCRC
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagaataggcgtttttatctgccactgcggcagcaatatcgccggtactgttgactgc
gccagagtggccgaaatatccacaggctttcccgatgtcgtctacgcgacagaccccatg
tatacctgcgccgaacctggtcaggtagccattgaggccgccatccatgaccacaggctc
gacggcgttgttgtggcatcatgcagtccgcgcatacatgagcccacattccgccacacg
gtggaacgggctggtctgaaccgttatatgtttgaaatggctaacattcgcgagcatgtt
tcctggatcggcaaagacagggacgccaacaccaacaaggccgcggaactggtgaaaatg
gcccttgccaagctgcgcaacaaccggcctcttgtggcgaagtcctttgaagccaacaaa
aaagtgttgattgtaggcggcggcgtcgccggcattcaggcggcgctcgactgcgctgac
ggaggcgttcctgttattctgctggagcgggagtcaaccatcggcggcaagatggcaaaa
ctcgacaaaacctttcccacagtggactgttcagcctgcattcttggcccaaaaatggtg
gatgtggctcagcaccccaacatcaccctgtacacatattccgaacttgaagatatttca
ggatatataggcaattttacagtcaaaatccacaagcgcgccacctatgtcaactgggag
aaatgcacaggctgcggggtgtgcagcgaaaaatgccccagtaaaaaaacgccggacgct
tttaatgaattgaccggcgtcacaacagccatcaacattccctttccgcaagccattccc
aaaaaggccgtcatcagtgccgaacactgccgtcagcttaccaaaggcaagtgtggcatc
tgcgccaaaacctgccctaccggcgctgttgtctacgacatgcaggacgacgtcgtcact
gaagaagtgggctgcattatcgcggccacgggctatgaccttatggactggacagtgtac
cgagaatacggcggcggacaatacccggacgtgataacttctctgcagtacgagcgactt
ctttcaacctctggccccaccggcgggcatatcagacgcccctctgacggtctggagccg
aaacacgtcgtttttatccaatgcgtgggttcacgcgacaaatctgtcggccgcccctac
tgttccggcttctgctgcatgtacacggcaaagcaggcggtgctgacaaaggatcacctg
ccgctttcccaatcgtacgtcttttatatggacatacgcgcgcctggcaagctctatgac
gaatttacccgccgcgctgttgaggaatacggcgttgagtacatacgcgggcgcgtatcc
gccgtttaccctgacggagagggcgcctacgtcgtcatgggcgttgatacgctgctcggt
cgtcctgttgaaataaaagcggacattgtagttctggccgtcggtatagaggccagccgg
ggcgcggcggcacttgcggaaaaactgcgcatctcctacgacaattacggcttttttatg
gaaagtcacgttaagctcaaaccggtggaaaccaacacagccggagtgtttctggccggc
gtgtgtcagggcgcgaaagacatcccggcctcggtggcccaaggttccgcaacagcagcc
aaagtgcttgccctctttgcacgcgaccgtctggagaatgacccgcagacagcccaggtt
gacacacgccgttgcgtcggatgcggcaagtgcattcgctgctgccccttcggcgccctc
aaggaaacgaccatacggggagagatcaaaacggatgtcattgaaactgtctgccaaggc
tgtggtctgtgcacatcaacctgtccccaaggcgctgtgcagctttcacatgccactgac
aaccagattcttgcggaggtgaacgcgctatgccggtgctga
DBGET
integrated database retrieval system
