Candidatus Desulfovibrio trichonymphae: RSDT_0603
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Entry
RSDT_0603 CDS
T05578
Symbol
rlpA2
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dtr01011
]
RSDT_0603 (rlpA2)
Enzymes [BR:
dtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RSDT_0603 (rlpA2)
Peptidoglycan biosynthesis and degradation proteins [BR:
dtr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RSDT_0603 (rlpA2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Saf-Nte_pilin
Motif
Other DBs
NCBI-ProteinID:
BAV92115
UniProt:
A0A1J1E2L6
LinkDB
All DBs
Position
794675..795415
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AA seq
246 aa
AA seq
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MIYIRNLFILFVLICFALALPVISDAALRKDISTKSYTVKKHKSTNVAKSDSTKHNVKGK
STAANSKSKSVAKDSMSRTDSREVWFRRAKENGELLAGMATWYGGKAHGGPTASGLDYDM
FTFTAAHRTLPIGTVVKVTDQDNGKSVIVCITDRGPYWRGRIIDLSYAAALQLDLSNRGV
GRVNLNVISDEHGTPLNADEAFYVRYSNARDSEMAGPFRAFADAAVLHEALRQAHPEAEV
VIGENK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgatttacattcgcaacttattcatattgtttgttcttatctgttttgcgctcgcatta
cccgtaatatccgatgcggcccttcgcaaagatataagcacaaaaagttacacggttaaa
aaacataaatcaacaaatgtcgcaaaaagcgattccacaaaacataacgtcaagggcaag
tccaccgcagcaaatagtaaaagcaagagtgttgccaaagattccatgagcaggactgac
agccgcgaggtttggtttaggcgcgccaaagaaaatggcgaattgctggcgggcatggcc
acttggtacggcggcaaggcgcacggtggtccgacagccagcggactggactatgacatg
tttacttttaccgcggcccaccgcaccctgcccataggcacggttgtgaaagtgactgat
caggacaacggcaaaagtgtcattgtgtgtatcacggatcgcggcccctactggcgcggt
cgtattattgatctctcctacgcggcggcgcttcagcttgatttgagcaatcgcggcgtt
ggcagggtgaatctgaacgttatcagtgatgagcatggtacgccgctgaacgctgatgag
gccttttatgtgcgctacagcaacgccagagattctgaaatggccggaccctttagggca
tttgctgacgctgctgtcttgcacgaggctttgcgtcaggcacaccccgaggctgaagtt
gtcataggcgagaacaaataa
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