Candidatus Desulfovibrio trichonymphae: RSDT_0613
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Entry
RSDT_0613 CDS
T05578
Symbol
gatB
Name
(GenBank) glutamyl-tRNA(Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00970
Aminoacyl-tRNA biosynthesis
dtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RSDT_0613 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
dtr03029
]
RSDT_0613 (gatB)
Enzymes [BR:
dtr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
RSDT_0613 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
RSDT_0613 (gatB)
Mitochondrial biogenesis [BR:
dtr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RSDT_0613 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
BAV92125
UniProt:
A0A1J1DTX1
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All DBs
Position
complement(806240..807679)
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AA seq
479 aa
AA seq
DB search
MTVCEVVIGLEVHIQLATASKLFCPCPTMFGQPPNTNVCEICLGMPGALPSLNRQAVHYA
ALVGLAANCTINLYSVFARKNYFYPDLPAGYQISQFDLPVCEHGCLSIRADGIEKNIGIT
RIHLENDAGKNIHAQDENVSYVDLNRAGTPLVEIVSEPDIRSPAEAVAYLKTLYGIVTYL
GVCDGNMEEGSFRCDANVSLRPAGSTRFGIRSEIKNLNSFKNVQRAIEYEIARQQGILDD
GDAVTQETRLYDAVKNVTIAMRSKEEAHDYRYFPDPDLLPVTISGEELDAWKNEMPELPH
TRLERFKAMTGLPEADIEMLVQHPNMADFFETAAGLSDARKTANYMLGPLLRECHARNLP
ADPAKWAMRPQALAELVRIVDQGLISAKIANDIFAEIFSTGAMPEAYIKEKNLGQISDSG
ALGAAVDAAVAAHPAETASYRSGKTKLLSFFVGQVMRATKGKANPALVNELLVRKLGRH
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgactgtatgtgaagtcgtcatcggcctggaagtgcacatccaacttgccacagcctca
aaattgttctgcccgtgtcccaccatgttcggccaaccgccaaataccaatgtctgcgaa
atctgcctcggcatgccgggcgcgttgccgtcactcaaccggcaggctgtgcattacgcg
gcgcttgtgggacttgccgcaaactgtacgatcaacctttattctgtctttgcgcgcaaa
aactatttttatcctgatcttccagcaggatatcaaatttctcaatttgaccttcctgta
tgtgaacacggctgcctgagcattcgggcggacgggattgaaaaaaacatcggcattacg
cgcattcatttggaaaatgatgcgggcaaaaatatccacgcgcaggacgaaaacgtcagc
tatgtcgatctgaacagggcgggaacaccgctcgtggaaattgtttcagaaccggacata
cgctcgcccgccgaagccgtggcgtatctgaaaaccctttacggcattgtgacctatctt
ggtgtgtgtgacggaaatatggaagaaggcagcttccgttgcgacgccaacgtttccctg
cgtccggcgggaagcacgcgtttcggcatccgctctgaaatcaaaaatcttaactcgttc
aaaaatgtgcagcgcgccatagaatatgaaatcgcccgccagcagggcatcctggatgac
ggagacgccgtgacgcaggaaacacgtctctatgatgccgtcaaaaatgttaccattgcc
atgcgcagcaaggaagaagctcacgactaccgctacttccccgatccggatctcctgccg
gtcacaatcagcggggaagaactggacgcgtggaaaaacgaaatgcctgaactgccgcat
acgcgccttgaacgctttaaagcgatgaccggcttgcctgaggcggacatcgagatgctt
gtgcaacacccgaacatggcggatttttttgaaacagcggcaggcttgtctgacgccaga
aagacggcaaactacatgctcggccccctgctgcgtgaatgccatgcccgcaatctgccg
gctgatccggcaaaatgggccatgcggccgcaagctcttgcggagcttgtgcgcattgtg
gatcaggggctgatcagcgccaaaattgccaacgatatttttgccgaaattttcagcacc
ggtgccatgcccgaagcgtatatcaaagaaaaaaatcttgggcagatttctgattccggc
gcgctgggagcggccgtcgacgcggctgttgccgctcaccccgcagagacggcctcgtac
aggagcggcaaaacaaaactgctcagcttctttgtgggtcaggtcatgcgcgctacaaag
ggcaaagccaaccccgcccttgtcaatgaacttcttgtacgcaagctgggtcggcactga
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