Candidatus Desulfovibrio trichonymphae: RSDT_0630
Help
Entry
RSDT_0630 CDS
T05578
Symbol
mrdA
Name
(GenBank) peptidoglycan glycosyltransferase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00550
Peptidoglycan biosynthesis
dtr01100
Metabolic pathways
dtr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RSDT_0630 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RSDT_0630 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dtr01011
]
RSDT_0630 (mrdA)
Enzymes [BR:
dtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RSDT_0630 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
dtr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RSDT_0630 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
BAV92142
UniProt:
A0A1J1DYG1
LinkDB
All DBs
Position
complement(830575..832470)
Genome browser
AA seq
631 aa
AA seq
DB search
MTMLKNNNTPPSSDIAENQPRGSVFRAWLKIYMENERYQPPRNGVILLQVLVGMLFFVLV
TRLWYLQIHHGDEFARQAHGNRLRHERIFAPRGRILDNNDKVLADNRTAWALSLVREDCR
DIPVTLTQISVWSGIPLSQIWEKYQQDRFKVKAFEPLLLLTDINFDLVALIESEIYAWPG
LKVVVRTKRNYPEKDMFAHVLGYVAEVNEKEMAADETLAMGDLVGKQGLELELEKQLRGQ
KGLYDVEVDAHARMLGKALREEPRSGNEMNLSINLALQQASWEAFGGEAGCAVVMEPDSG
KLRAFVTSPAYDNNLFSTGISKRDWDALRTSNRFPLQNRVIQSVYPPGSVWKLLMTALFL
ERGISPRETVFCPGEVTLGNQVFRCWKHGGHGSVNMESAITNSCDVYFYLMAERIGIDKI
EEFAKASGFGRPTGISLPHERSGLVPSREWKWRRFGRAWVRGETYNTSIGQGFTLVTPVQ
IAVYVSALLNGGDMLKPQLLENDGRVVTGRLPAKAETRNFIVGAMRKTASAGTAHVVYRR
DADMGGKTGTAQVVKLKMGAGDRRLRTSEMEYTQRDHAWIATWGSKNGRTYVVVVMVEHG
GGGSSVAGPIAKKIYDHIFGPAQDTPARGAQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgctgaaaaataataacacgccgccttcgtcggacatcgcagaaaatcagccc
cgcgggagcgtgtttcgcgcttggctgaaaatttatatggaaaacgaacgctaccagccg
ccgcgcaacggcgttattctgttgcaggtgctggtgggcatgctcttttttgtattggtg
acgcgcctgtggtatctgcaaatccaccacggcgacgagttcgcgcggcaggcgcatgga
aaccgcctgcgccatgaacgtattttcgcgccgcgcggccgtattctggacaacaacgac
aaggtgctggcagacaaccgcacagcctgggctctctccctagtgcgtgaagactgccgt
gacatcccggtcacactgacgcagatcagcgtttggtccggcatccccctttcacagata
tgggaaaaataccagcaggatcgtttcaaggtaaaagcctttgagccgcttctgctgctc
accgacatcaattttgatctggttgccctcattgaatcagaaatatacgcatggccgggc
ctaaaagttgtcgtgcggacaaagcgcaattatccggaaaaagatatgtttgcgcatgtg
ctcggctatgtggctgaagtcaatgaaaaagaaatggctgccgatgaaacgttggccatg
ggcgatctggtgggcaaacagggtctggaactggaactggaaaaacagctgcgcggccag
aaaggcctgtatgatgtagaagtggacgcccacgcgcgcatgctcggcaaagccctgcgc
gaagaaccgcgcagcgggaatgaaatgaacctctccatcaacctcgcccttcagcaggcg
tcttgggaggcgtttggcggcgaggccggctgcgctgtcgtcatggagccggattccggc
aaactgcgcgcgtttgttacctcgcccgcctatgacaacaatcttttctcgacaggcatc
tccaagcgtgactgggacgctctgcgcacaagcaaccgctttccgctgcaaaaccgcgta
atacaaagcgtttatccccccggttctgtctggaagctgcttatgacagccctgtttctg
gaacgtggtatatccccccgtgaaactgtgttctgccccggcgaagttacgctgggcaat
caggttttccgctgctggaaacacggcggacacggcagcgtcaatatggaaagcgccatc
accaattcctgtgacgtttatttttatctcatggccgaacggatcggcattgacaagata
gaagaattcgccaaggccagcggcttcgggcgccccaccggcatcagcctgccgcatgaa
cgttcaggccttgttccttcccgggaatggaagtggcgccgtttcggcagagcctgggtg
cgtggagaaacatacaacacttccatcgggcagggatttactctggtcacgcccgtgcag
atcgccgtgtatgtttcggcgctgctgaacggaggcgatatgctcaaaccccaacttctg
gaaaacgacggacgtgttgtcacagggcggctgccggcaaaggcggagaccagaaacttt
attgtcggcgcaatgcgaaaaacagcgtccgccggcacggcgcacgttgtttaccgcaga
gacgcagacatgggcggcaaaaccggcacagcccaggtggtcaagctgaaaatgggcgcc
ggtgaccgtcggttgcgaacgtctgaaatggaatacacacagcgtgaccatgcctggata
gccacctggggttccaaaaacggcagaacctatgttgttgttgtgatggtggagcacggc
ggcggcggctccagcgtggccgggccgatagcgaaaaaaatttacgatcacattttcggg
cccgcgcaagacacgcctgcgcgcggcgcgcaatga
DBGET
integrated database retrieval system
