Candidatus Desulfovibrio trichonymphae: RSDT_0677
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Entry
RSDT_0677 CDS
T05578
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dtr03110
]
RSDT_0677 (clpB)
Chaperones and folding catalysts [BR:
dtr03110
]
Heat shock proteins
HSP100
RSDT_0677 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
ATPase_2
Sigma54_activat
nSTAND3
TniB
AAA_14
AAA_7
NACHT
AAA_24
IstB_IS21
TsaE
ABC_tran
RNA_helicase
AAA_18
Cep57_CLD_2
NBD_SMAX1
T2SSE
AAA_3
Dynamitin
DNA_pol3_delta2
OspD
NUDE_C
Motif
Other DBs
NCBI-ProteinID:
BAV92189
UniProt:
A0A1J1DU25
LinkDB
All DBs
Position
complement(891906..894506)
Genome browser
AA seq
866 aa
AA seq
DB search
MDISRFTDKAREAVSDAQTLAAGMGHQETDAEHLAFVLARQDNGIVPRILEHAGIQPKAF
AVAVETALRKRPQISGGGVDSTKIIITPRLAKVLGEAQNEAKRLKDEYVSVDHLFAALVG
VEPSSPLGQTLKEYGVTRARFVMAMEELRGSARVTSPNPEGTFEALDKYARDLVEAAHQG
KMDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEGLAFRIVKGDVPEGLKGR
KLFALDMGALIAGAKYRGEFEERLKAVLGEVEKSEGRIILFIDELHTIVGAGRTEGSMDA
GNLLKPMLARGELHCIGATTVDEYRKYIEKDPALERRFQPVMVDEPTVEDSISILRGLKE
RFEVHHGVRISDSAIVDAVTLSHRYISDRQLPDKAIDLIDEAAAMIRTEIDSLPADLDEA
NRKVMQLEIEREALRRETDEASRERLQRLENELADLRGEQTAMREQWKNEKGSIDTVRKI
KGQIEQTRLAIEQAEQAYDLTRAAELKYSKLLDLQKKLAQFSGGDVGDAPRLLREEVRPD
DVAEIVARWTGIPVARLVESEREKLLKLADELHKRVIGQDEAVSAVADAVLRARAGLSDP
CRPTGSFIFLGPTGVGKTELCKTLAEALFDTEDNMVRLDMSEYMEKHSVSRLIGAPPGYV
GYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNTLLQMLDDGRLTDSQGRTVDFRNSIV
IMTSNIGSLHLLEGISPDGALEDGAREQVMEALRAHFRPEFLNRVDETVVFLPLRREQIA
RIVDLQLARLRLRLEERKISLVMTDVARDFIAVAAYDPVYGARPIKRYVQQRVETPLARE
ILAGNICDGQDVTVDVKDEEFIFGSY
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggacatcagcagatttacggacaaagcccgcgaagcggtgagcgacgcgcaaactctg
gccgccggcatgggccatcaggaaactgacgccgagcatctggcgtttgttcttgctcgg
caggataacggtattgtgccccgtattctcgaacacgcgggcatacagcccaaagcgttt
gccgttgcggtggaaacggcgttgcgcaagcgtccgcagatttcgggcggcggcgtggat
tcgacaaaaatcataatcaccccgcgtctggcaaaagtgctgggtgaggcacagaacgag
gcaaaacgtctgaaagacgaatacgtgagtgtggatcatctcttcgccgcacttgtcggc
gtggagccgtcttctccgcttgggcagacgctgaaagaatacggcgtcacccgcgcgaga
tttgtcatggccatggaggaattgcgcggcagcgcgcgcgtgacaagtcccaatcccgaa
ggcacgtttgaggcccttgacaaatacgcccgcgatcttgtcgaggccgcgcatcagggc
aaaatggacccggttattggccgtgatgcggaaatacgccgtgtcatacgcattctttca
cgacgcaccaagaacaatcctgtgctgatcggcgaggcgggcgtgggtaaaaccgccatt
gtcgaggggcttgcctttcgcattgtcaagggagacgtgccggaaggcttgaaagggcgt
aaattattcgcgctggacatgggcgcgctgattgcgggtgcgaaataccggggagaattt
gaagagcgcctcaaggccgtactcggcgaagtggaaaaaagcgaaggcaggatcattctg
tttattgacgagttacacaccattgtgggtgccggcagaacagaaggctccatggacgca
ggcaatctgctcaaacccatgctggcgcgcggcgagctgcattgcatcggcgccaccact
gtggatgaataccgcaaatatattgaaaaagacccggcgcttgaacggcgttttcagccg
gtgatggtggatgagcctacggtggaggactccatttccatcctgcgcggcctgaaagaa
cgttttgaggtgcaccacggggtgcgcatcagcgattcggccattgtggatgccgtgacg
ctttcgcaccgttatatttcagatagacagctgccggacaaggccattgacctgattgac
gaagccgccgccatgatacgcacggagattgactccttgccggccgatctggacgaagcc
aatcgtaaagtcatgcagctggaaattgaacgcgaggccctgcgccgtgaaacggacgag
gcttcgcgcgaacgccttcagcgactggagaacgagcttgccgatctgcgtggtgagcag
accgccatgcgtgaacagtggaaaaatgaaaagggttccatagatacggtgcggaagatc
aagggacagattgagcagacgcgtcttgccattgagcaggccgaacaggcctatgatctc
accagagcggctgaactcaagtattcaaaattgcttgatttgcagaaaaaactggctcag
ttttccggtggcgatgtcggcgatgccccgcgcctgttgcgtgaagaagtgcggcctgac
gacgtggcggaaattgtggccagatggacgggtattccggttgcgcggctggttgagtct
gaacgcgaaaaattgttgaagctcgccgatgagctgcataagcgtgtcattggccaggac
gaggctgtgagcgcggtggccgacgctgtgcttcgcgcgcgggcagggctgtccgatccg
tgtcggccgaccggctcctttatttttctgggtccgaccggcgtgggcaagacagagctt
tgcaaaacgcttgccgaggcgttgtttgacactgaagataatatggtgcgccttgacatg
agcgaatatatggaaaaacattccgtgtcgcggcttatcggcgcgccccccggttatgtg
ggctatgacgagggtgggcagttgaccgaagcggtgcgccgcaaaccctattccgtcatt
ttatttgatgaaattgaaaaagcgcatcccgatgtcttcaacacgcttttgcagatgctt
gatgacggccgcctgacggacagtcagggacgtacggtggattttcgcaacagcattgtg
attatgacctccaacatcggctccctgcatctgctcgaaggcatatctccggacggcgcg
ctggaagacggcgcgcgggagcaggttatggaggctttgcgcgctcattttcgtccagaa
tttttgaaccgcgtggatgaaaccgtggttttcctgccgctgaggcgtgagcaaatcgcg
cgtattgtggatttgcagcttgcccgcttgcgtttgcggcttgaggagcgcaagatcagt
cttgtcatgacggacgttgcgcgtgacttcattgccgtggcggcgtatgatcctgtttac
ggcgcacgtccgatcaaacgttacgtgcagcagcgtgtggagacgccgcttgcccgcgag
attttggcgggcaacatttgcgacggacaggacgtcacggtggatgtgaaagatgaggag
tttatttttggctcctactaa
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