Candidatus Desulfovibrio trichonymphae: RSDT_0703
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Entry
RSDT_0703 CDS
T05578
Name
(GenBank) SNF2/helicase domain-containing protein
Organism
dtr
Candidatus Desulfovibrio trichonymphae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
SWIM
Flavi_DEAD
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
BAV92215
UniProt:
A0A1J1DQU8
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All DBs
Position
934330..937584
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AA seq
1084 aa
AA seq
DB search
MSRSEQNAVSEMCRIFLQDSVQEYIRDAAHHILSGNEVQKINIQEGETWTARGSVQGENL
QVYTPSLNFSLIDRATTSHCNCPDAFSGVCRHVAALALLLMEDIRREQGDDIDDFPVTVD
WKHSFRSFFSTAMEAEPGRYYLIFRFTPEDGRLLVSFFRARQNKTGLSSVHAEVTLEQII
YNPDWCEASPQLPHVASQIGRCLDYYGHRVKIPDGLLSWFFWAIRNEYYLLWEDTDQPCG
IESAPFALKLNPILDDAGLRFQVLIQHEGRPPLTIRTLNEQADEDGQTIAEQPPTTFHGQ
MPLWVCFNHKFYPVQTCLNPELVHKLLHDCPVVPHEEISEFLDRVWTRMPASELYRPQEF
LKLISPIFQPATYNPKLFLNEEGSLLTLEIDNIYETVHGEFTINGPNPDFQTGSYAYKGK
TYLVRRHQEKEAQLLTELARAGFQSRSTKLWFLEPEEAIVFLLDVYPAMVDYYRIYGEHA
LTRYKVRAAKSFVTADVTSNEKEKWFSLDINVSYEGQSLPLEKIWKAWTHGKRYVQLKDG
AYTNLPEAWLSKLARRLQSLGLDPSKPPRQKFQLFEAPVLDTLLEDMPNATTDSFWNSLR
EKIRSFREITPIASPKGLNASLRSYQQQGLSYLNFLSEYGFGGILADEMGLGKTVQSLAF
IQYMAERHREGQNLIVVPTSVLPNWEREAKKFVPNLKCVIIYGARRGGLLKHAADAHIVV
TTYALLRRNLEEMEKYDFNTVILDEAQNIKNPNTITARAVRRLNARMRLCLSGTPIENNL
FELWSLFEFLMPGFLGSQHAFQCGIVKPIKDGDTETLEYLRTRVRPFILRRTKAEVAQDL
PPKLENVTFCALEDAQAELYTALARKLRAQVLADVDEKGIAKSQMSILDALLKLRQICCH
PRLLKIEMPGFSNNLPSGKFNAFKDMVTEIVEGGHKMLVFSQFVRMLHIIRQWLDASKMP
FCYLDGASKERLEMVDKFNNSPDIPIFLISLKAGGTGLNLTSADYVIHYDPWWNPAVENQ
ATDRTHRIGQTRQVFSYKLICENTVEEKIVKLQASKRDMAEAIIPGRGAWKPLTRDDLEM
IFDI
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttcagaacaaaacgccgtgagtgaaatgtgcaggatattcctgcaggattcc
gtgcaggaatacatccgtgacgcggcacatcatatactctccggcaacgaggtgcaaaaa
ataaatattcaggagggcgaaacctggacggcgcggggttccgtgcagggagaaaacctt
caggtgtataccccctccctgaatttttccctgatcgaccgcgcaacaaccagccactgc
aactgcccggacgctttttccggagtctgccgccatgtggcggcgcttgccctgctcctt
atggaagacatacgcagggaacagggcgatgatatagacgatttcccggtgaccgtggac
tggaagcacagtttccgcagctttttttccacagctatggaagcggaaccagggcgctac
tacctgatttttcgcttcacgccggaggatggccgcctgcttgtatcgtttttccgggcg
cgccagaataaaaccggcctctccagcgtacatgcggaagtaacgcttgagcagatcatc
tacaacccggactggtgcgaggcttcgccgcaattgccgcacgtggccagccagataggc
cgttgcctcgactactacggccacagggttaaaattccggacggcctcctctcctggttt
ttctgggccatacgcaacgaatattatctgctctgggaagacacggatcaaccctgcggc
attgaaagcgccccctttgccctgaaactcaaccccattctggacgatgcgggtctgcgc
tttcaggtgcttattcagcatgaaggccgcccgcccctgacaatacgcacactgaatgaa
caggcggacgaagacggccaaaccattgcggaacagccgcccaccacctttcacgggcag
atgccgctgtgggtctgctttaaccacaaattttaccctgtgcagacatgcctgaacccc
gaacttgtccacaaactcctgcacgactgccctgttgtgccgcacgaagaaatttcagaa
tttctggaccgcgtctggaccaggatgccggcctcggaactttaccggccgcaggaattt
ttaaaactcataagccccatttttcagccggccacatacaatcccaaactctttctgaat
gaagaaggcagtctgctgacgctggaaatagacaatatttatgaaaccgttcacggcgag
ttcaccataaacgggcctaatcccgatttccagacaggcagctacgcatacaagggcaaa
acctatctggtgcgccgtcatcaggaaaaagaggcccagctgctcaccgaactcgcccgg
gccggctttcagtcgcgctcgacaaaactctggttccttgaaccggaagaggccatcgtc
tttctgctcgatgtttaccccgcaatggtggattattaccgcatttacggagaacacgcg
ctcacccgctacaaagtgcgcgcggcaaaatcctttgtcacggcagatgtgacaagcaat
gaaaaagaaaaatggttttcgctcgacatcaacgtgagttatgaaggtcagagcctgccg
cttgaaaaaatatggaaggcatggacgcacggcaaacgctatgtgcaattgaaagacggc
gcatacacaaacctgccggaagcctggctgtcaaaacttgcccgcaggctgcaaagtctg
ggtttggacccttcaaaacccccgcgacagaaatttcagctgtttgaagctcctgtgctc
gacactctgttggaggatatgccgaacgcgaccacagactcgttctggaactccctgcgc
gaaaaaattcgctctttccgcgaaatcacgcccattgcttcgcccaagggactgaacgca
tccttgcgttcctaccaacagcagggcctctcgtacctgaattttctttcggaatacgga
ttcgggggcattctggccgatgaaatgggccttggcaaaaccgtgcagtcgctcgctttt
attcaatatatggccgaacgccaccgtgagggacaaaacctcatcgttgtgcccacgtct
gttttacccaactgggaacgcgaggcgaaaaaatttgtgcccaacctgaaatgcgtcatt
atttacggcgcgcgacgcgggggtctgctcaaacatgcggcggacgcacacattgtcgtc
accacatacgctctgttgcgacgtaatctggaagagatggaaaagtacgacttcaacacc
gtcattctggatgaagcccagaacataaaaaatcccaacaccatcacggcccgcgccgtg
cgccgcctgaacgcccgcatgcggctgtgcctttcgggcacgcctattgaaaacaacctc
tttgaactctggtcgctctttgaatttctcatgccgggttttttgggatcccagcacgca
ttccagtgcggcattgtcaaacccatcaaggacggcgatacggaaacactggaatacctg
cgcacccgcgttcgcccctttattctgcgccgcaccaaggctgaagtggcgcaggatttg
ccgcccaaactcgaaaacgtgaccttctgtgcgcttgaagacgctcaggcagagctgtat
acggcccttgcccgcaagctgcgcgcccaagtgctggccgatgtggacgaaaaaggcatt
gccaaaagccagatgtccattctggacgcgctgctcaaactgcgtcagatatgctgccac
ccgcgtctgctcaaaatagagatgccggggttcagcaacaatctgccgtcaggcaaattt
aacgctttcaaagacatggtcacagaaatagtggaaggtgggcacaaaatgcttgttttt
tcgcagtttgtgcggatgctgcacatcatacggcaatggctcgatgcctcaaaaatgccc
ttctgctaccttgacggagcgagcaaagaacgccttgaaatggtagacaagttcaacaac
agccccgacatacccatttttctcatttctctaaaagcaggcggcaccggtctgaatctg
acctcagccgactatgtgatccactacgacccgtggtggaacccggctgtggaaaatcag
gccacagatcgcacgcaccgcataggccagacgcgtcaagttttttcctacaagctcatc
tgtgagaacacggtggaggaaaaaattgtcaaactgcaggcaagtaagcgcgacatggcc
gaggccatcattcccggcaggggggcgtggaagccgctcacgcgcgacgatctggagatg
atcttcgacatatga
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