Candidatus Desulfovibrio trichonymphae: RSDT_0874
Help
Entry
RSDT_0874 CDS
T05578
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine1402-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dtr03009
]
RSDT_0874 (rsmI)
Enzymes [BR:
dtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
RSDT_0874 (rsmI)
Ribosome biogenesis [BR:
dtr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RSDT_0874 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
BAV92386
UniProt:
A0A1J1DRC4
LinkDB
All DBs
Position
complement(1174425..1175261)
Genome browser
AA seq
278 aa
AA seq
DB search
MPLTSPRLWVVATPLGNPGDLSPRARYVLETADVILAEDTRRAAQLCARHGIHARNFLSF
YEHNEEQRAEEALRLLRAGRSLALISDGGTPLVADPGYRLVRACRKEGITVSPLPGPCAP
AVALSAAGLPPLPFTFLGFLPRNAAGQKALFAAFAATPGALVFFERKDRLKVSLALALTV
LGPREMAVCRELTKTHEEFILTRLEKSAELSDGLLGELTIVIGPPEQTERTSVEEVRLLV
NLEAEPGDKPRALARRLQRLTCGWSRKELYSLILDNKN
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgacttctcctcgtctctgggtggtggccacaccgcttggcaaccctggtgat
ttatcgccgagggcacgctacgttctggaaacagcggatgtgatcctggcggaagacacg
cgccgagcggcgcagctttgtgcccggcacggcattcatgcccggaattttttaagtttt
tacgaacacaatgaagaacaacgagccgaagaagccctgcgtctgctcagggcaggacgc
tcgctcgcgctgatttccgacgggggcacgccgcttgtggcggacccaggctatcgtctg
gtgcgggcctgccgcaaagagggcataacggtttctccgctgcctgggccgtgcgcccct
gcggtagccctttccgctgctggtctccccccgcttccctttacctttctgggttttctc
ccccgcaacgccgccgggcaaaaggcgctgttcgcggcttttgccgcaacgccgggtgct
cttgtcttttttgaacgcaaagacagactcaaggtaagcctcgcgctcgcgctgactgtt
cttggcccccgagagatggctgtctgtcgtgaattgaccaaaacacacgaggaatttata
ctcacgcggctggaaaagagcgcggagctgtcggacggcctgttgggcgagttgaccatt
gtcattggtccgccggaacagacggaacgcacttcagtggaagaagtgcgcctcctggtc
aacctggaagcagagccgggcgacaagccccgcgctctggcacgacggctgcaacggctg
acatgcggctggagtaggaaagagctctattccttgattttagacaacaaaaactga
DBGET
integrated database retrieval system
