Candidatus Desulfovibrio trichonymphae: RSDT_0936
Help
Entry
RSDT_0936 CDS
T05578
Symbol
rsmD
Name
(GenBank) 16S rRNA m2G966 methyltransferase
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dtr03009
]
RSDT_0936 (rsmD)
Enzymes [BR:
dtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
RSDT_0936 (rsmD)
Ribosome biogenesis [BR:
dtr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RSDT_0936 (rsmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_37
UPF0020
Methyltransf_25
Methyltransf_15
PrmA
Methyltransf_ANTKMT
Methyltransf_31
RsmJ
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
BAV92448
UniProt:
A0A1J1E4R4
LinkDB
All DBs
Position
complement(1228536..1229087)
Genome browser
AA seq
183 aa
AA seq
DB search
MRIIAGTLGGRRLNTVSGEGFRPAMGRTREALFSMLTARGIDWQTTRALDIFAGSGSLAF
EAVSRGAPRALFVENAVHAVRCLRENVAALGVHAQTRVVCANALHFLQRPATETFDLVFL
DPPYGKNLLAPSLTALLENAWLASGAFVTAEIEKKAVFELPAPLTLSAERFFGRTRICIW
MSP
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcattattgcaggaaccctgggcggacgcagacttaataccgtgagcggggagggt
tttcgccctgccatgggcagaacgcgcgaagcactgttctccatgctcacagcacggggc
attgactggcagacaacgcgcgcgctggatatttttgccggcagcggcagtctggccttt
gaggccgtgagccgcggcgcgccacgcgcgctttttgttgaaaacgcggtccatgccgtg
cgctgtctgcgtgagaatgtcgcggcattgggggttcacgcgcaaacgcgcgttgtgtgc
gcaaacgcgttgcattttttgcaacgtcctgcgacggaaacctttgatctggtttttttg
gatccgccgtacggcaaaaatttgcttgcgccgtcgttgacggctttgcttgaaaatgcc
tggctggcctctggggcctttgttacggcggaaattgaaaaaaaggccgtgtttgaactg
cctgctccgctcacgctgtcggcagagcgttttttcggcagaacccgtatctgtatctgg
atgtcgccatga
DBGET
integrated database retrieval system
