Candidatus Desulfovibrio trichonymphae: RSDT_0974
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Entry
RSDT_0974 CDS
T05578
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RSDT_0974 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dtr01007
]
RSDT_0974 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dtr03016
]
RSDT_0974 (aspS)
03029 Mitochondrial biogenesis [BR:
dtr03029
]
RSDT_0974 (aspS)
Enzymes [BR:
dtr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
RSDT_0974 (aspS)
Amino acid related enzymes [BR:
dtr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RSDT_0974 (aspS)
Transfer RNA biogenesis [BR:
dtr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RSDT_0974 (aspS)
Prokaryotic type
Other AARSs
RSDT_0974 (aspS)
Mitochondrial biogenesis [BR:
dtr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RSDT_0974 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BAV92486
UniProt:
A0A1J1DZB1
LinkDB
All DBs
Position
complement(1273701..1275542)
Genome browser
AA seq
613 aa
AA seq
DB search
MTESMPEDIQPADLQQEHQKFIQDVGGWLRTHCCGALTLDDVDQEVCLMGWVQYRRDHGG
LIFVDLRDCFGLTQVVFSPDTASGAHNNAHILRSEYVLAVRGKVRPRPAGMVNPAMPTGK
IEVVAIDWKLLNTSKPPPFSVEERSETGENLRLAWRYLDLRRPRMQANLRLRHLVAQTVR
RFLNENAFVEVETPMLTKSTPEGARDFLVPSRLNFGQFYALPQSPQLFKQLLMIGGFDRY
FQIVRCFRDEDLRADRQPEFTQIDIEMSFVNENAVMCMAEGLMARVFSDVQGISLKRPFP
VLSWDESMNRYGVDKPDTRFGLELHDITHIVYASAFKLFAAAKLVKAMKVTGGDAFTRKE
IDECTEFVKIYGAQGLAWIKIKSGEWQSPVAKFLSERERYSIAQVLDLQQGDIVFFQAGE
PAVVNAALGNLRLRLGEHLHLVSENSFNFLWVTDFPLYEYDNAEKRYVARHHPFTAPAHG
HLERMLSDPENARARAYDLVLNGNEIGGGSIRIHSADVQRRMFAALGFSPDSAEKRFGFL
LRALELGAPPHGGIAFGLDRLVMLLAGASSIRDVIAFPKTQKAACLLTDAPSGVASGQLC
ELGLRLREPAAET
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatctatgccggaagacatacaacctgctgatctgcagcaggaacatcaaaaa
tttattcaggatgtgggtggctggttgcgcacgcactgttgcggtgccctgacgctggat
gatgtcgatcaggaagtctgtctgatgggttgggtgcaataccgtcgggatcatgggggg
cttatctttgtcgacctgcgtgactgttttggtttgacacaggttgttttcagccctgat
acagcctcgggcgctcacaacaatgcgcacatcctgcgttcggaatatgtgctcgctgtg
cgcggcaaagtgcggccgcgtccggcaggcatggtcaatccagctatgccaacagggaaa
attgaggttgtggccattgactggaaacttttgaacacttcaaaacccccccctttttct
gttgaggaacgctcagagacaggggaaaatctgcgccttgcctggcgctatcttgacctt
cgccgtccccgcatgcaggcaaatttgcgactgcgccatctggtggcccagacagtccgg
cgttttctgaatgaaaacgcctttgtggaagtggaaacacccatgcttacaaaatcaact
cctgaaggagcccgggattttcttgttcccagccggctgaactttggtcagttttatgca
ctgccgcagtctccacaattatttaaacaattacttatgattggtggttttgatcgatat
tttcagatagtccgctgttttcgcgatgaagatctgcgcgctgaccgacagccggaattc
acgcaaattgacattgaaatgagctttgtcaatgaaaatgctgtgatgtgtatggctgaa
ggcctcatggcgcgcgttttcagcgacgttcaagggatttcgctgaaacggccctttccc
gtcctgtcttgggatgaatctatgaaccgctatggcgttgacaaaccggatacgcgtttt
ggccttgaactgcacgatattacccatattgtgtatgcttcagctttcaagctttttgcc
gccgcaaagcttgtcaaggcgatgaaagtgactggaggagatgcctttacccgcaaggaa
attgatgagtgcacggaatttgtaaaaatttatggtgcacagggtttggcctggatcaaa
attaaatctggtgaatggcaatcacccgttgcaaagtttctctccgagcgtgagcgctac
agcattgcgcaagtacttgatctgcaacagggcgacatcgttttttttcaagccggagaa
cctgccgtggtcaatgcggctctgggaaatttgcgtctcaggcttggcgagcatttgcat
cttgtttctgaaaacagttttaattttttgtgggtgacggattttccactctatgaatat
gacaatgcggaaaaacgctatgtcgcccgtcatcatccttttacggcgcctgcgcatgga
catcttgagcgtatgctcagtgaccccgaaaatgcccgcgcccgtgcctatgatcttgta
ctcaacggcaatgaaataggcggcggctccatacgcattcattctgccgatgtgcagcgg
cgtatgtttgcggcgttgggtttttctcctgattctgcggaaaaacgcttcggttttctc
ctccgcgctttggaacttggtgccccaccgcatggcggcattgcctttggccttgatcgt
ctggtcatgctgcttgcaggtgcctccagcatacgcgacgtcattgcgtttcctaaaacg
caaaaagctgcctgcctgcttacggatgcgccgtcgggcgttgcctccggccagttgtgt
gaacttgggctcagattgagagaaccggctgccgagacatga
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