Candidatus Desulfovibrio trichonymphae: RSDT_0977
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Entry
RSDT_0977 CDS
T05578
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtr03032
]
RSDT_0977 (gyrA)
03400 DNA repair and recombination proteins [BR:
dtr03400
]
RSDT_0977 (gyrA)
Enzymes [BR:
dtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RSDT_0977 (gyrA)
DNA replication proteins [BR:
dtr03032
]
Prokaryotic type
DNA Topoisomerases
RSDT_0977 (gyrA)
DNA repair and recombination proteins [BR:
dtr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RSDT_0977 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ArgZ-like_C_1st
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
BAV92489
UniProt:
A0A1J1DRJ4
LinkDB
All DBs
Position
complement(1278461..1280968)
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AA seq
835 aa
AA seq
DB search
MSDKPQVSIEKELRKSYLEYSLSVIIGRAIPDARDGLKPVHRRIMFAQHELANNYNRPHK
KSARIVGDVIGKYHPHGDSAVYDALVRMAQDFSMRDPLVDGQGNFGSVDGDAPAAMRYTE
VRMSRLAQEFLNDLDKDAVDFRPNYDNTLLEPSVLPTKVPNLLLNGSSGIAVGMATKIPP
HNLGELCGALQLLLDNPQCSVDDLMEFVKGPDFPTYGFVYAGKALSDAYHTGRGTVKVRG
RVELEERKKGAQSIVIKEIPFALNKSSLVEKIAALVNDRKIDGIADLRDESDRNGIRIVI
DLKRGVIADIVINSLYKFTSLETSFGINMLAVAENRPQLLTLKTALGHFVDHRREVVIRR
TRFDLEKAQARAHILEGLQIAIDNIDAVVALIRASASPEEARLSLMRAFSLSEVQAKAIL
EMRLQRLTGLQREELQNEYNELLGKIEFFRSVLDNPEVLRNELKRELREIRETFATPRRT
EVLTEALTGIDIEDLIPDEEVVITLSRRGYMKRTNLENYQQQKRGGKGITALLISEGDYV
QEFLTTTNHQYLCLFTNRGRMLQLKAHQVPDGSRTAKGVHINNILPLEEGEWVTTVLALR
EFADDKYFLFVTRRGMVKCSAASLYARCRKTGIMAVGLRKDDELVAVRPIRMDSHIVLAT
ADGLAIRFACGDLRPLGRVATGVKGIALRRKDCVVAVVVLKEPDQSTEIMSISANGYGKR
TSVDLYRLQSRGGKGVANFKVTAKTGKVLGAMPVRDNDGLVLLTSASKVVRIGVDEVRSM
GRATQGVMLVRLDGGACVMGFDRVDEGGQILKADDENVSQIVVDGFTDMDRGDAN
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagacaaaccgcaagtcagcatagaaaaagaacttcgcaaatcctatctggagtat
tcgctctcggtcattatcggacgcgccattccggacgcacgcgacggactgaagcctgta
caccggcgcattatgtttgcccaacatgaactcgccaacaactataaccggccgcataaa
aaatctgcgcgtattgtgggtgatgtgataggcaaatatcacccgcacggcgattccgca
gtttatgacgccctagtgcgcatggcccaggatttttccatgcgcgaccctctggttgac
ggtcaggggaattttggttctgtggatggcgacgccccggcggcaatgcgctatactgag
gtgcgtatgtcgcgccttgcccaggaatttttgaacgaccttgacaaggacgcggtggat
ttcagaccgaattacgacaacaccctgctggagccctctgttttgccgaccaaggttccc
aatctgttgcttaacggttcttccggaattgccgtgggcatggccaccaagattccccct
cacaatctgggggaattgtgcggcgcgttgcaactgctgcttgataaccctcaatgcagc
gttgacgatctcatggaattcgtcaaagggccggatttccccacctatggctttgtctat
gccggcaaggccctctcggacgcctaccacaccggccgcggcacggtgaaagtgcgtggt
cgagttgagctggaagagcgtaaaaagggcgcacagtctattgttattaaagaaattcct
tttgctctgaacaaatcaagccttgtggaaaaaatcgccgctttggtcaatgaccgcaaa
attgacggcattgcggatttgcgtgacgaatctgaccgcaacggcattcgcattgtcatt
gatttgaagcgcggggttattgccgatattgtcatcaattccctgtataaattcacgtcg
ctggaaacaagcttcggcatcaatatgctggctgtggcggaaaacaggcctcaattgctg
accctcaaaactgccttgggccattttgtcgaccacaggcgtgaagtggttatacggcgc
acacgttttgatcttgaaaaggcgcaggcgcgggcgcatatactggaaggcctgcaaatc
gccatagacaatattgacgcggtggttgcgcttatccgcgcttctgcaagccctgaggaa
gcccgtctcagcctcatgcgcgcgttttctctttctgaagtccaggccaaagccattctg
gaaatgcgtctgcagcgtcttaccggcctacaacgcgaagaattgcaaaatgagtataat
gaacttttgggcaagatcgaatttttcagatctgtgctggataatccggaagtactccgc
aacgagctcaaacgggagttgcgtgaaatacgcgaaacatttgctacgccgcgccgcacg
gaagtcctgacagaagcgttgaccggcattgatattgaagatttgataccggatgaagaa
gtggtgatcacgctctctcggcgcggctatatgaagcgtaccaatcttgaaaattaccag
cagcagaagcgcggcggcaagggcataaccgcgctgcttatttctgagggcgattatgta
caggaatttctgactacaacaaaccatcaatatctttgcctgtttaccaacaggggacgc
atgctccagctcaaggcacatcaggtgcccgatggcagtcgtacggccaagggcgtgcac
attaacaacattttgccgctggaagagggtgaatgggtcacaacggtgctggccctgcgc
gaatttgccgacgacaaatattttctctttgtaacgcgacgcggcatggtgaaatgttcc
gccgcttcactctatgcgcgttgccgcaaaacaggcatcatggctgtggggcttcggaaa
gacgatgagcttgtggctgtgcgccccatacgcatggacagccatattgtactcgctacg
gccgacggtcttgctatacgttttgcctgcggtgatttgcgtccgctgggccgtgtggct
acgggtgtcaagggcattgccttgcgcagaaaagattgcgtggtggccgtggtcgtcctg
aaagagcctgatcagagcacggaaatcatgtccatttctgctaacggttatggcaagcgt
accagtgtggatttgtaccgtctgcagtcgcgtggtggcaagggagtggccaatttcaag
gtaaccgcaaaaacaggcaaagtgctgggtgccatgcctgtgcgggacaatgacggcctt
gtgctgctcacttcagcgagcaaggttgtgcgcataggagtggacgaagtgcgtagtatg
gggcgggcaacacagggtgttatgctggtgcgtctggacggcggcgcgtgcgttatgggc
tttgaccgtgtggatgagggtggtcagatactaaaagccgatgacgaaaatgtgtcgcag
atcgtcgttgacggcttcaccgatatggatcggggagatgcgaactga
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