Candidatus Desulfovibrio trichonymphae: RSDT_1015
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Entry
RSDT_1015 CDS
T05578
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00230
Purine metabolism
dtr00240
Pyrimidine metabolism
dtr01100
Metabolic pathways
dtr01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RSDT_1015 (nrdD)
00240 Pyrimidine metabolism
RSDT_1015 (nrdD)
Enzymes [BR:
dtr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
RSDT_1015 (nrdD)
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GFIT
Motif
Pfam:
NRDD
ATP-cone
Motif
Other DBs
NCBI-ProteinID:
BAV92527
UniProt:
A0A1J1DRN8
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All DBs
Position
1329509..1331611
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AA seq
700 aa
AA seq
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MYFSAITKRDGRVAEFDVAKITAALHKAGKATGEFEEREARRLTMQVLSLAKAMHLPNPP
DVESIQDVVEQVLLDSPFRATAKAYILYREQRAQLRSIKTMANVDLLEGYLNKMDWRVRE
NSNMGFSLQGLNNYISSDITSEYWLNRIYTPEIREAHANGDFHLHDLSLLSVYCVGWDLA
DLLRQGFKGVAGNVESAPAKHFRSALGQLANFFYTLQGEAAGAQAVSSFDTLLAPFLRSD
GIGYEEVKQALQEFVFNINIPTRVGFQTPFTNITLDMNVPSLLKNTPVIIGGRDQDTVYG
DYQAEMDVLNRAFAEVMMAGDNKGRVFTFPIPTYNITKDFDWGSERFESVWKMTGRYGIP
YFSNFVNSDMSPEDARSMCCRLRLDTRALRKRGGGLFGANPLTGSIGVVTMNMPRLGHLS
GDEQDFLIRLDALMKLAKDSLVIKRKELERFTGCGLYPYTTFYLRDVNARHNAYWFNHFS
TIGIVGMNEACLNLMGKGIATAEGQDFSLRVLAHMRRKLEEFQVETGDFFNLEATPAEGT
SYRFARLDKKKFPEILFANGKAGEESAAATQAPYYTNSTHLPVNYSTDIFDALDLQDKLQ
GSYTGGTVLHGYLGEEVTDTKTVRNMVRAITDNYSLPYFTLTPTFSICADHGYLKGEQTM
CPVCSRETEVYSRVVGYLRPVSRWNDGKRAEYANRTPYVV
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtatttttccgccattacaaagcgggatggacgcgttgcggaatttgacgtcgccaaa
atcactgccgcgctgcacaaagcaggcaaagcaacaggagaatttgaagaacgcgaggcc
agacggctgaccatgcaggtgctttctctggcaaaagccatgcatttgccgaatccgccg
gacgtagagagcattcaggatgtggttgagcaggttttgctggactcgccgttcagggcg
acggccaaagcctatatcctgtaccgggaacaacgcgcccaattgcgcagcatcaaaacc
atggccaacgttgaccttctcgaaggctacctcaacaagatggactggcgggtgcgggaa
aacagcaacatgggcttttctctgcaagggctgaacaactatatctcttctgacattacc
tcagaatactggcttaatcgtatttatacgcctgaaatacgcgaagcccacgccaacggc
gattttcacctgcacgatttgagtttgctgtccgtttattgtgtgggctgggatcttgcc
gacctgctccggcaaggcttcaaaggcgttgcgggaaacgtggaaagcgcccctgccaag
catttccgttcagccttgggacaactcgcaaactttttttacaccctgcagggcgaagcc
gcgggcgcgcaagccgtttccagctttgatacactgctcgcgccgtttcttcgctctgac
ggcataggatacgaagaagtgaaacaggctttgcaggaatttgtattcaatatcaacatt
cctacgcgggtaggctttcaaacgccgtttacaaatattacgctggatatgaatgtgccg
tcgcttctgaaaaatactcccgttatcatcggcggcagagatcaggacacagtatacggg
gattatcaggctgaaatggatgtgctgaatcgtgcgtttgcagaagttatgatggctgga
gacaacaaaggccgtgtgtttacatttccgatcccgacttacaatatcactaaggatttt
gattggggcagcgaacgctttgaatccgtgtggaaaatgacaggacgctatggaatcccc
tatttttccaattttgtaaactcggatatgtccccggaagacgcacgttccatgtgctgc
cgtttacggctcgacacccgcgcattgcgcaaacgtggcggcggactgttcggagccaac
cctctcaccggttccatcggcgttgtcacaatgaacatgccgcgtctgggccatctttcc
ggggacgaacaagacttcctgatccggctggacgccttgatgaaacttgccaaagacagc
cttgtcatcaagcgcaaggaactggaacgcttcacaggctgcgggctttacccgtatacc
acattttatttgcgggatgtgaatgcccgtcacaacgcatattggttcaaccatttttcc
accatcggcatcgtcggcatgaatgaagcgtgcctgaacctcatgggcaagggcattgca
accgctgaaggccaggatttttctctgcgggttcttgcccacatgcgcagaaaattggaa
gaatttcaggtagaaacaggcgatttttttaatctggaagcaacccccgccgaaggaacc
tcataccgttttgcgcggctggacaagaaaaaattcccggaaattctttttgccaacggc
aaagcaggggaagagtctgctgccgcgacgcaggcgccttattatacaaattccacgcat
ctgcctgtcaattactccacagatatttttgacgcgcttgatttacaggacaaactgcaa
gggagctacaccggcggaactgtgcttcatggttatcttggggaagaagtcacggataca
aaaacagtgcgaaacatggtacgcgccattacagacaattatagtttgccctatttcacg
ttgacgcccacgttcagcatatgcgccgaccacggctacctgaagggagaacagacgatg
tgcccggtgtgcagtcgagaaacggaagtctattcaagggtggtggggtatctgcggcct
gtgtcgcgttggaatgatgggaaaagggcagagtacgcgaacagaacgccgtatgttgta
taa
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