Candidatus Desulfovibrio trichonymphae: RSDT_1064
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Entry
RSDT_1064 CDS
T05578
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00470
D-Amino acid metabolism
dtr01100
Metabolic pathways
dtr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RSDT_1064 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RSDT_1064 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dtr01011
]
RSDT_1064 (alr)
Enzymes [BR:
dtr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
RSDT_1064 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
dtr01011
]
Precursor biosynthesis
Racemase
RSDT_1064 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
BAV92576
UniProt:
A0A1J1E540
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All DBs
Position
1388705..1389835
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AA seq
376 aa
AA seq
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MSECTFTPSMCHIDLPALQRNFARLGKSAALMPVIKSDAYGHGLLPVARSLADVGARRFA
VGTVSEGAALREAGLTQEIVPLLGGVNAEDWHRAAAHSLVPLLADREDLEKADFCCRPDK
TLRVALKCETGMARLGFTAEDIPAVLEFLRARPHLAPALVLSHLACADRPLDLAYTHAQT
ERFTAVCDSLRVAFPDMERSLANSAGLLGLPETRFEVSRPGIALYGGNPFAGTALENCGA
SLEWVMSVSAPVLCVQRVKAGQSVSYGRIFTTPADMTIAVIAAGYATGLDRRLSNSMDVL
IGGRRVPQVGRICMGLLMADVSSLPETRRGDEAWLIGGPVAHGQRAVTAREMADELDTIS
YEILCRMGAMNPRTYG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatgcacatttacgccgtccatgtgtcatattgatctgccagcgctgcagcgc
aactttgcgcgtcttggcaagtcggcggcgcttatgccggttattaaaagcgacgcttat
ggccacggacttttgccggtggcgcgctctctggccgacgtcggcgcgcgtcgctttgcc
gtcggcacagtgagtgaaggcgcggccttgcgcgaagccggtcttacgcaggagattgtg
cccctgttgggcggtgtgaacgcggaagactggcaccgcgcggccgcacacagcctggtg
cccctgctcgccgacagggaagacttggaaaaagcggatttctgctgccgtcctgacaaa
acgttgcgcgtcgcgcttaaatgtgaaaccggcatggcccgtctgggttttacagcggaa
gacatccccgctgtgctggagtttctgcgcgcccggccgcatcttgcgccggcgcttgtg
ctctctcatctcgcctgtgccgacagaccgttggatcttgcgtacacgcacgcgcagaca
gagcgctttaccgctgtttgcgacagcctgcgcgtggcttttccggatatggaacgatct
ctggcaaactcggcgggtctgctgggtctgccggaaactcgtttcgaggtaagtcgtccg
ggcatagccctatacggcggaaacccttttgcgggaaccgcgctggaaaactgcggcgcc
agcctggaatgggtgatgagcgtgagtgctcccgtgctttgcgtgcagcgtgtcaaggcc
ggacagagcgtttcttacggacgcatttttacgacgcccgccgacatgactatagccgtt
atcgcggctggctacgccacagggcttgaccgcaggctttccaattcaatggacgtgctg
atcggcggccgccgcgtcccccaggtgggacgtatctgcatgggacttttgatggctgat
gtttccagcctgcccgaaacgcgacgcggcgacgaggcatggctgatcggcggcccggtc
gcgcatgggcaacgagccgttaccgcgcgggaaatggccgatgagctggatactatttcc
tatgagatactctgccgcatgggggccatgaatccgcgcacatacggttga
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