Delftia tsuruhatensis: BI380_03490
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Entry
BI380_03490 CDS
T04496
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dts
Delftia tsuruhatensis
Pathway
dts03030
DNA replication
dts03430
Mismatch repair
dts03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BI380_03490
03430 Mismatch repair
BI380_03490
03440 Homologous recombination
BI380_03490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dts03032
]
BI380_03490
03400 DNA repair and recombination proteins [BR:
dts03400
]
BI380_03490
Enzymes [BR:
dts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BI380_03490
DNA replication proteins [BR:
dts03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BI380_03490
DNA repair and recombination proteins [BR:
dts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BI380_03490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AOV00483
LinkDB
All DBs
Position
734652..738185
Genome browser
AA seq
1177 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTNRINAIVKAAAEDGQVALAVTDFNNLFGGVKFYREGRSKGVKP
VLGAEIQIEGENGAAISRIIVLVQSPLGYHNLSELLARGWTRNVVKGQAVHTWAWLQELG
QGLIVLAGAQAGPVGQALMRGDEAGAAAVAQRLASMFPHRFFIELQRAGRPDDEAHVLAA
VQLADRLNLPVVATHPIQFFGPDDYEAHEARVCIAEGEILANPKRVRRFTRDQHFKTVAQ
MQALFADIPSAIANTVEIARRCSLTLVLGKPQLPNFPVPEGMTMDEFFRQESFAGLEERL
IHLYPDPAKREAQRERYVERLEFEIGTILKMGFPGYFLIVGDFIKWAKLNGCPVGPGRGS
GAGSLVAYVLKITDLDPLEYNLLFERFLNPERVSMPDFDVDFCQANRDRVIDYVKQLYGR
DAVSQIATFGTMAARAAIRDVGRVLDMSYTFCDGISKLIPNKPGLHVTLKYPPNPKKEGD
KYTYAIEAEPMLAERIDKEEDVKTLIEMAQKLEGMTRNIGMHAGGVVIAPGKLADFCPLY
QQPGSDSAVAMYDKDDVEAVGLVKFDFLGLATLTILEIAREFIIKRHKGQENFAFENIPL
DDARTYQLFSEGKTEAVFQFESRGMQGMLRDAKPSRLEDLIALNALYRPGPMDLIPSFVA
RKHGKEVVEYPHPLVEKVLAETYGIMVYQEQVMQTAQVLGGYSLGGADLLRRAMGKKKVE
EMVMHRGIFREGAAKQGISEEKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTAWLKVHY
TAEFYCGNMTVEMDNTDKLKVLYEDALKMGISFEPPDVNRGMYRFEPVTDKVIRYGLGAI
KGTGQQAIEAIIAAREGRGVGPRGADKGPFKSLADFCVRVDRTRLNKRTLEALIKGGAFD
AIELNRAALVASIDHAFEFANKTLANANQGGLFDMMGEDAVGSSTQEPPLADALPWGVKE
RLTQEKTAVGFYLSGHLFDEVEKEVRRFVRTPLAELRDSREPQTLAGIISDFRAINGQRG
RLGLFKIDDGSGVIEASVDENTLNTYRDLLKDDEFVVITGRLQLDHFSGGLRMKAQQLFN
LADARCRFARYLQVSVGEKMPDVVGLLRQFPAVVEQGEHGELQRGMKVRLGLVCEDERGS
ASCELALGDGSRFYPSDAALAAWYAQAGSAQVKVVYE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccatttgcgcctgcacaccgaattttccgtcgtggacggaaccaaccgcatc
aacgccatcgtcaaggccgccgccgaggatgggcaggtcgcactggccgtcacagacttc
aacaacctgtttggcggcgtcaagttctatcgcgaaggccggtccaagggcgtcaagccc
gtgctgggcgcggaaatccagatcgagggcgaaaacggcgccgcgatctcgcgcatcatc
gtgctggtgcaaagcccgctgggctaccacaacctgtccgagctgctggcccggggctgg
acccgcaatgtggtcaagggccaggccgtgcacacatgggcctggctgcaggagctgggc
caaggcctgatcgtgctggccggcgcccaggccggcccggtgggccaggcactgatgcgc
ggtgacgaggccggcgcagcagccgtcgcccagcggctggcgagcatgttcccgcaccgc
ttcttcatcgagctgcagcgcgcaggccggcctgacgacgaagcccatgtgctggccgcc
gtgcaactggccgatcgcctgaacctgcccgtggtcgccacgcaccccatacagttcttc
ggccccgacgactacgaagcgcacgaggcgcgcgtgtgcatcgccgagggcgagatcctg
gccaaccccaagcgtgtgcgccgcttcacgcgcgaccagcatttcaagaccgtcgcgcag
atgcaggcgctgtttgccgacattcccagcgccatcgccaacaccgtggaaattgcgcgt
cgctgcagcctgacgctggtgctgggcaagccgcagctgcccaacttccccgtgcccgaa
ggcatgaccatggacgagttcttccgccaggagtcctttgcgggactggaggaacgcctg
atccatctctatcccgaccccgccaagcgcgaggcccagcgcgagcgctatgttgagcga
ctggagttcgagatcggcaccatcctcaagatgggctttccgggctacttcctcatcgtg
ggtgacttcatcaagtgggccaagctcaacggctgtcccgtgggtccgggccgcggatcg
ggcgccggctcgctggtggcctacgtgctcaagatcacggacctggacccgctggaatac
aacctgctgttcgagcgtttcctcaatcccgagcgtgtgtccatgcccgacttcgacgtg
gacttctgccaggccaaccgcgaccgcgtcatcgactatgtgaagcagctgtacggccgc
gacgccgtcagccagatcgccaccttcggcaccatggccgcgcgcgcggccatccgcgac
gtgggccgcgtgctggacatgagctacaccttctgcgatggcatctccaagctcattccc
aacaagcctggcctgcacgtcacgctcaagtacccgcccaaccccaagaaggagggcgac
aagtacacctacgccatcgaggccgagcccatgctggccgagcgcatcgacaaagaagaa
gacgtcaagacactgattgaaatggcccagaagctcgaaggcatgacacgcaacatcggc
atgcacgcgggcggcgtggtgattgccccgggcaagctggccgatttctgcccgctgtac
cagcagccgggcagcgactcggccgtggccatgtacgacaaggacgatgtggaggccgtg
ggcctggtgaagttcgactttctgggcctggccacgctgaccatcctggagattgcgcgc
gagttcatcatcaagcgccacaagggccaggagaacttcgcattcgagaacatcccgctg
gacgatgcgcgcacctaccagctgttttccgagggcaagaccgaggccgtgttccagttt
gaatcgcgcggcatgcagggcatgctgcgcgacgccaagcccagccggctggaagacctg
atcgccctgaacgccctgtaccgcccgggacccatggacctgattcccagcttcgtggcg
cgcaagcacggcaaggaagtggtggagtatccgcatccgctggtcgaaaaggtgctggcc
gaaacctacgggatcatggtctaccaggagcaggtgatgcagacggcccaggtgctgggc
ggctactcgctgggcggcgccgacctcttgcgccgtgccatgggcaaaaagaaggtcgag
gaaatggtcatgcaccgcgggatcttccgcgagggcgcggccaagcagggcatcagcgag
gaaaaggccgacgaggtcttcgacctgatggagaagttcgcgggctacggcttcaacaag
tcgcacgccgccgcctactcgctgctggcctatcacacggcctggctgaaggtgcactac
acggccgagttctactgcgggaacatgaccgtggaaatggacaacaccgacaagctcaag
gtgctgtacgaagacgcgctcaagatgggcatcagcttcgagccgccggatgtcaaccgc
ggcatgtaccgcttcgagcccgtcaccgacaaggtcatacgctatggcctgggtgccatc
aagggcacgggccagcaggccatcgaggccatcatcgcggcccgtgaaggccgcggcgtg
ggcccgcgcggcgccgacaaggggccgttcaagagcctggccgacttctgcgtgcgcgtg
gaccgcacgcgcctgaacaagcgcacgctggaagccctgatcaagggaggtgccttcgat
gccatcgaactgaaccgcgcggccctggtggcctccatcgaccatgccttcgagttcgcc
aacaagacgctggccaatgccaaccagggcgggctgttcgacatgatgggcgaggacgcc
gtgggctccagcacccaggagccgcccctggccgatgcgttgccctggggcgtgaaggag
aggctgacccaggaaaagaccgccgtgggcttttacctgtcgggccatctgttcgacgag
gtcgaaaaggaggtgcgccgcttcgtgcgcacgccgctggcggagctgcgcgacagccgc
gagccccagaccctggccggcatcatcagcgacttccgcgccatcaacggccagcgcggg
cggctgggcctgttcaagatcgatgacggctcgggcgtgatcgaggcttcggtggacgag
aacacgctcaatacctatcgcgatctgctcaaggacgacgaattcgtcgtcatcaccggg
cgcctgcagctggaccacttcagcggtggcttgcgcatgaaggcacagcagctgttcaac
ctggccgatgcgcgctgccgcttcgcgcgctacctgcaggtcagcgtgggcgagaagatg
cccgacgtggtcggcctgctgcgccagtttcccgccgtggtggagcagggtgagcatggc
gagctgcagcgcggcatgaaagtgcgcctgggactggtctgcgaggacgagcgcggctcg
gccagctgcgagctggccctgggcgacggcagccgcttctatcccagcgacgcagccctg
gccgcctggtatgcccaggcgggcagcgcccaggtcaaggtggtctacgaatga
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