Delftia tsuruhatensis: BI380_04065
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Entry
BI380_04065 CDS
T04496
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
dts
Delftia tsuruhatensis
Pathway
dts02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dts00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BI380_04065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dts03021
]
BI380_04065
Transcription machinery [BR:
dts03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BI380_04065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
PhyR_sigma-like
HTH_24
HTH_11
GerE
HTH_38
HTH_29
HTH_40
HTH_10
HTH_36
HTH_20
UPF0122
HTH_Mga
DUF1804
LacI
HTH_17
HTH_Tnp_4
HTH_22
DUF134
Motif
Other DBs
NCBI-ProteinID:
AOV05797
UniProt:
A0AAX3SF31
LinkDB
All DBs
Position
complement(849800..850276)
Genome browser
AA seq
158 aa
AA seq
DB search
MHSLYQNHHPWLESLLRKRLGNRDDAADLAQDTFVRLLRSPVPQQDIREPRRYLATIARG
LVTDLFRRRTLEQSYLDYLAQLPQSLAPSPEEQAIVQQTLLDVDRMLQGLAPKVREAFVL
SHFEELSYPEIAERLGVSLRTVSNYLTRAMEHCCLVLA
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
gtgcacagcctctaccagaatcaccatccctggctggaaagcctgctgcgcaagcgcctg
ggcaaccgtgacgatgcggccgacctggcccaggacaccttcgtgcgcctgctgcgctcg
ccagtgccgcagcaggacatccgcgagcccaggcgctacctggccaccatcgcccgcggc
ctggtcaccgacctgtttcgccgccgcacgctggagcagtcctatctggactatcttgca
cagctgccgcagtcgctggcgccttcgcccgaggagcaggccatcgtccagcagaccctg
ctcgacgtggaccgcatgctccagggccttgcacccaaggtgcgcgaagccttcgtcctg
tcccatttcgaggaactgagctaccccgagatcgccgagcgcctgggcgtgtcgctgcgc
accgtcagcaactacctgacccgggcgatggagcattgctgcctggtcctggcatag
DBGET
integrated database retrieval system