KEGG   Delftia tsuruhatensis: BI380_04065
Entry
BI380_04065       CDS       T04496                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
dts  Delftia tsuruhatensis
Pathway
dts02020  Two-component system
Brite
KEGG Orthology (KO) [BR:dts00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BI380_04065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dts03021]
    BI380_04065
Transcription machinery [BR:dts03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BI380_04065
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Sigma70_ECF PhyR_sigma-like HTH_24 HTH_11 GerE HTH_38 HTH_29 HTH_40 HTH_10 HTH_36 HTH_20 UPF0122 HTH_Mga DUF1804 LacI HTH_17 HTH_Tnp_4 HTH_22 DUF134
Other DBs
NCBI-ProteinID: AOV05797
UniProt: A0AAX3SF31
LinkDB
Position
complement(849800..850276)
AA seq 158 aa
MHSLYQNHHPWLESLLRKRLGNRDDAADLAQDTFVRLLRSPVPQQDIREPRRYLATIARG
LVTDLFRRRTLEQSYLDYLAQLPQSLAPSPEEQAIVQQTLLDVDRMLQGLAPKVREAFVL
SHFEELSYPEIAERLGVSLRTVSNYLTRAMEHCCLVLA
NT seq 477 nt   +upstreamnt  +downstreamnt
gtgcacagcctctaccagaatcaccatccctggctggaaagcctgctgcgcaagcgcctg
ggcaaccgtgacgatgcggccgacctggcccaggacaccttcgtgcgcctgctgcgctcg
ccagtgccgcagcaggacatccgcgagcccaggcgctacctggccaccatcgcccgcggc
ctggtcaccgacctgtttcgccgccgcacgctggagcagtcctatctggactatcttgca
cagctgccgcagtcgctggcgccttcgcccgaggagcaggccatcgtccagcagaccctg
ctcgacgtggaccgcatgctccagggccttgcacccaaggtgcgcgaagccttcgtcctg
tcccatttcgaggaactgagctaccccgagatcgccgagcgcctgggcgtgtcgctgcgc
accgtcagcaactacctgacccgggcgatggagcattgctgcctggtcctggcatag

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