Delftia tsuruhatensis: BI380_22450
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Entry
BI380_22450 CDS
T04496
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dts
Delftia tsuruhatensis
Pathway
dts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BI380_22450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dts03019
]
BI380_22450
03400 DNA repair and recombination proteins [BR:
dts03400
]
BI380_22450
Enzymes [BR:
dts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BI380_22450
Messenger RNA biogenesis [BR:
dts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BI380_22450
DNA repair and recombination proteins [BR:
dts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BI380_22450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
AOV03910
UniProt:
A0AAX3SMG4
LinkDB
All DBs
Position
complement(4848629..4850560)
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AA seq
643 aa
AA seq
DB search
MSAAHSVLQAVFGYEQFRGPQEAIVSHVVAGGDALVLMPTGGGKSLCYQVPAIVRQQQGH
GVAVVVSPLIALMHDQVGALHEAGVSAAYLNSTLSYDETQEVEWRLQSGDITLLYAAPER
LNTPRFLGLLDDLHAQGKLSLFAIDEAHCVSQWGHDFRPEYRALSVLHERYAGVPRIALT
ATADALTRADIVERLQLESARHFVSSFDRPNIRYRIAEKKDVSNQLLRFIEREHEGEAGV
VYCQSRKRVEELAQTLSQAGVPALPYHAGLPFETRQLHQDRFLREDGIVIVATIAFGMGI
NKPDVRFVAHVDMPKNIEGYYQETGRAGRDGLPADAWMAYGLSDVVNQRRMIDESPAEDT
FKQVMRGKLDALLGLAEATDCRRVRLLAYFGEQYGLGAPGEDAETDIEGRPLQRVAKTAC
GNCDNCLEPPALWDGTDAARKLLSTIYRVHEASQLTFGAGHIMDVLRGKDTEKVRQYGHE
KISTFGLGKDYSEPQLRGVMRQLLATGALGLHKITSENSGHSFDTLCLAEGSREVLRGNV
QVQLREAVAAPRTRTSKRATQPNAAAASLGPDAQVRFINLKAWRAEVAREHNLPAYVIFH
DATLAAIAERNPASLDDLQGISGMGAKKLDAYGAEVLRVVATG
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgccgcgcattccgtcctgcaagccgtgttcggctacgaacaattccgcggtccg
caggaagccatcgtctcgcatgtggtcgccggcggcgatgcgctggtgctcatgcccacg
ggcggcggcaagagcctgtgctaccaggtgccggccatcgtgcgccagcagcagggccac
ggcgtggcggtggtggtgtcgccgctgatcgcgctgatgcacgaccaggtgggcgcgctg
cacgaggccggtgtcagcgccgcctacctgaactccacgctgtcctatgacgagacgcag
gaagtcgaatggcgcctgcaaagcggcgacatcacattgctgtatgccgcgcccgagcgc
ctgaacacgccgcgcttcctgggcctgctcgacgacctgcatgcccagggcaagctgtcg
ctgttcgccatcgacgaggcccactgcgtgagccagtggggccatgacttccggcccgaa
taccgcgcgctgagcgtgctgcacgaacgctatgcgggcgtgccgcgcattgcgctcacg
gccacggccgatgcgctgacgcgcgccgacatcgtcgagcggctgcagctggagagcgca
cggcatttcgtcagcagcttcgaccgccccaacatccgctaccgcatcgccgagaagaag
gacgtcagcaaccagctgctgcgcttcatcgagcgcgagcacgagggcgaggccggcgtg
gtctattgccagtcgcgcaagcgcgtggaggagctggcccagacgctgagccaggccggc
gtgcccgccctgccctaccacgcgggcctgcccttcgagacgcgccagctgcaccaggac
cgcttcctgcgcgaggacggcatcgtcatcgtggccactatcgccttcggcatgggcatc
aacaagcccgatgtgcgcttcgtggcgcacgtggacatgcccaagaacatcgagggctac
taccaggaaaccggccgcgcaggccgcgacgggctgcccgccgatgcctggatggcctac
ggcctgtccgacgtggtcaaccagcgccgcatgatcgacgaaagcccggccgaggacacc
ttcaagcaggtcatgcgcggcaagctcgatgccctgctgggcctggccgaggccacggac
tgccgccgcgtgcggctgctggcctacttcggcgagcagtacggcctgggcgcaccggga
gaagacgcagagacggacattgaaggccggccgctgcagcgcgtggcaaagaccgcctgc
ggcaactgcgacaactgcctggagcccccggccctgtgggatggaacggacgccgcgcgc
aagctgctgtccaccatctaccgcgtgcacgaggccagccagctgacctttggcgcgggc
cacatcatggacgtgctgcgcggcaaggacaccgagaaggtgcgccagtacgggcacgag
aagatctccaccttcggcctgggcaaggactacagcgagccccagctgcgcggcgtgatg
cgccagctgctggccaccggcgccctgggcctgcacaagatcaccagcgagaacagcggc
cacagcttcgacaccctgtgcctggccgaaggctcgcgcgaagtgctgcgcggcaatgtc
caggtacagctgcgcgaggccgtcgcagcgccgcgcacgcgcacctccaagcgcgccacc
cagcccaacgcggccgccgccagcctggggcctgatgcccaggtgcgcttcatcaacctc
aaggcctggcgcgccgaggtcgcgcgcgagcacaacctgccggcctatgtgatcttccac
gacgccacgctggccgccattgccgagcgcaacccggcctcgctggacgacctgcagggc
atcagcggcatgggcgccaagaagctggacgcctatggcgccgaggtgctgcgggtggtg
gccacgggttga
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