Delftia tsuruhatensis: BI380_24250
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Entry
BI380_24250 CDS
T04496
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dts
Delftia tsuruhatensis
Pathway
dts03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BI380_24250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dts03400
]
BI380_24250
Enzymes [BR:
dts01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BI380_24250
DNA repair and recombination proteins [BR:
dts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BI380_24250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AOV04226
LinkDB
All DBs
Position
5237745..5241269
Genome browser
AA seq
1174 aa
AA seq
DB search
MASHWQPGLIALHGNQTEVLADTVLAWLAAHPLDVLEPEVVLVQSNGMAEWFKMRMAEQL
GVCAAARVELPARFVWRSYRQVLGRQAVPRESPLDKTPMTWRLMRLLPQCLHDPAFAPIA
GFLRPGEPERLLQLAQRLADLFDQYQIYRADWLDAWEAGHDVLPMPLRPGVADAPVSEGQ
LWQPRLWRAVLAELDEDQRGATRARLQGRVLAALQSGEPPAAPLARRVVVFGISQLPLSL
LEFLAAIARHSQVLLAVPNPCRFHWADAIDGRELLRMARRRQPLRGGRDLAQLPLEAMHA
HAHPLLAAWGRQSRDYVRQLDAFDTTGAAAQLQMPRVDLFDETDAEDLRTAPLLAQVQQR
IRDLVPLAEHPPLEVARADRSIVFHSAHSVVRELEVLHDQLLQMLARPTDPGQPGQAPLA
PRDVVVMLPSIETAAPSIRAVFGQYGRHDPRHIPFDIADLGARASSPLAVALHWLLRLPQ
QRCRLSELCDLLDVPAIAARMGLAADDLPQLTRWMAGAGIRWGLNAPQRGALGLQACGEH
NSAWFGLQRMLLGYASGVAQDGQAFGGIEPYDEVGGLSAELAGVLAALLERMLAWWREAE
QPAMPEAWAQRFRALLQDFFKAQDDEDEAMLAALDAALTDWQRACEQAGYAQAVELGVAQ
EAWMQALEQPSLSQRFRAGGVTFCTLMPMRAIPFEVVCLLGMNDGDYPRRATRSDFDLMA
LPGQQRPGDRARRDDDRQLMLEALLSARRALYISWTGHHVRDNSEQPPSVLVSQLRDYLE
AGWRGEGGQPLLAQRTQQHPLQPFSRRYFEEGSPWTTYAREWRAAHAQSDGADALPALPA
QSRPPFVPDASAPLTLARLTDFLRHPARAYLRQRLQVRFEQEDNPVVDEELFQLDGLTEY
LLVQQLQQQVAAGLDEPGQAPQAMEDSVRAAVARLTRSGRLPLAGLGARGARALQSSVTP
SLRAWRQQLDRYAHPAPRRRLLIEDDGLVFDDWIDGLRQSCETEESPDADDAQCWLLLDP
RNLLNAKGRPHADKLMPVYLRSLALAASGSQAELRVVARDGLVQVLPMDPSDALARLRAL
MALWREGQNGPLPLPLRSGLAMAEGFPAAAQQAYEGGHLVSGEGEDPSWARCYPDFEALA
ADGRFEALAHAVHAPLLDWVAAQVQVQPYQADAP
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
gtggcatcgcattggcagccgggcttgatcgccctgcacggtaatcagacggaggtgctg
gccgatacggtgctggcatggctggctgcgcacccgctggacgtgctggagccggaggtg
gtgctggtgcagagcaacggcatggccgagtggttcaagatgcgcatggccgagcagctg
ggcgtgtgcgccgccgcgcgcgtggaactgcccgcgcgctttgtctggcgcagctaccgc
caggtgctgggccgccaggccgtgccgcgcgaatcgcccctggacaagacgcccatgacc
tggcggctcatgcgcctgctgccgcagtgcctgcatgacccggccttcgcccccattgca
ggctttctgcgccctggcgagcccgagcggctgctgcagctggcccagcgcctggccgac
ctttttgaccaataccagatctaccgcgccgactggctggacgcctgggaggccgggcat
gacgtgctgcccatgcccttgcgccctggtgtggcggacgccccggtgtccgaaggccag
ctgtggcagccgcgcctgtggcgcgccgtgctggccgagctggacgaggaccagcgcggc
gccacgcgcgcgcgcctgcagggccgggtgctggccgcgctgcagtccggcgagccgccg
gccgcgccgctggcgcgccgcgtggtggtgttcggcatcagccagctaccgctgagcctg
ctggagttcctggccgccattgcccgccacagccaggtgctgctggccgtgcccaatccc
tgccgcttccattgggccgacgccatcgacgggcgcgagctgctgcgcatggcgcggcgc
cgccagccgctgcgcggcggccgcgacctggcgcagctgccgctggaggccatgcatgcc
cacgcccatccgctgctggccgcctggggtcgtcaaagccgcgactatgtgcgccagctc
gacgccttcgacaccacgggtgccgccgcgcagctgcagatgccgcgcgtggacctgttc
gacgaaaccgatgccgaggacctgcgcaccgcgccgctgctggcccaggtacagcagcgc
atccgcgacctggtgccgctggccgagcacccgccgctggaggtggcgcgggccgaccgc
tccatcgtgttccacagcgcgcacagcgtggtgcgcgagctggaggtgctgcacgatcag
ctgctgcagatgctggcccggccgaccgatcccgggcagccggggcaggcaccgctggca
ccgcgtgacgtcgtagtcatgctgccgtccatagagaccgccgcgccctcgatacgcgcc
gtgttcggccagtacggcaggcatgatccgcgccacattccctttgacattgccgacctg
ggcgcacgcgccagcagcccgctggccgtggccctgcattggctgctgcgcctgccgcag
cagcgctgccggctcagcgagctgtgcgacctgctcgatgtgccggccatcgccgcgcgc
atgggtctggcggccgacgacctgccccagctcacgcgctggatggccggggccggcatc
cgctggggactcaatgcgccgcagcgcggcgccctgggcctgcaggcctgcggcgagcac
aacagcgcctggttcggcctgcagcgcatgctgctgggctatgccagcggcgtggcgcag
gacggccaggcctttggcggcatcgagccctatgacgaagtgggcggcctgtcggccgag
ctggccggcgtgctggccgcgctgctggagcgcatgctggcgtggtggcgcgaggccgag
cagcccgccatgcccgaggcctgggcgcagcgctttcgcgcgctgctgcaggacttcttc
aaggcgcaggacgatgaggacgaggccatgctggccgcactggacgccgccctcacggac
tggcagcgcgcctgcgagcaggccggctatgcgcaggccgtggaactgggcgtggcccag
gaggcctggatgcaggcgctggagcagccctcgctgtcgcagcgctttcgggccggtggc
gtgaccttttgcacgctgatgcccatgcgggccattcccttcgaggtggtctgcctgctg
ggcatgaacgatggcgactatccgcgccgcgccacgcgcagcgacttcgacctgatggcg
ctgcccggccagcagcgccccggcgaccgcgcgcgccgcgacgatgaccgccagctcatg
ctcgaagccctgctgtccgcgcgccgcgcgctctacatcagctggactggccaccatgtg
cgcgacaacagcgagcagccgccctcggtcctggtctcccagctgcgcgactacctggag
gccggctggcgcggcgaaggcggccagccgctgctggcgcagcgcacgcagcagcacccg
ctgcagcccttcagccgccgctatttcgaagaaggttcgccctggaccacgtatgcgcgc
gaatggcgggccgcgcatgcgcagtctgacggcgcggacgcgttgcctgcgctgcccgcg
cagtcgcgcccgccctttgtccccgacgcctcggcgccgctgacgctggcccggctcacc
gatttcctgcgccacccggcgcgcgcctacctgcgccagcgcctgcaggtgcgcttcgag
caggaggacaaccccgtggtggacgaggagctgttccagctcgacggcctgaccgaatac
ttgctggtgcagcagttgcagcagcaggtggcggccggcctggacgagcccgggcaggcg
ccccaggccatggaagacagcgtgcgcgccgccgtcgcgcgcctcacgcgctcggggcgg
ctgccgctggcggggctgggcgcgcgcggcgcgcgggcgctgcagtcctcggtcacgcct
tcgctgcgggcctggcgccagcaactggatcggtatgcccatcccgcgccgcgcaggcgg
ctgctgatcgaggacgatggcctggtgttcgacgactggatcgacgggctgcgccagtcc
tgcgaaaccgaagagtcccccgatgcggacgacgcacagtgctggctgctgctggacccg
cgcaacctgctcaatgccaagggccggccccatgccgacaagctcatgccggtctacctg
cgcagcctggcgctggccgccagcggctcgcaggccgagttgcgcgtggtggcgcgcgac
ggcctggtgcaggtcctgcccatggacccctccgacgcgctggcacggctgcgtgcattg
atggccctgtggcgcgaaggccagaacggcccgctgcctttgccgctacgcagcggcctg
gccatggccgaaggctttcccgctgcggcacagcaggcctatgagggcggccatctggtc
agcggcgaaggcgaggacccgtcctgggcccgctgctatcccgatttcgaggccttggct
gccgatgggcgcttcgaggccctggcccatgccgtccacgcgccgctgctcgactgggtg
gccgcgcaggtgcaggtccagccctaccaggcggatgcaccatga
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