Delftia tsuruhatensis: BI380_24260
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Entry
BI380_24260 CDS
T04496
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dts
Delftia tsuruhatensis
Pathway
dts03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BI380_24260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dts03400
]
BI380_24260
Enzymes [BR:
dts01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BI380_24260
DNA repair and recombination proteins [BR:
dts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BI380_24260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
RecD_N
Helicase_RecD
AAA_22
PhoH
UvrD-helicase
SLFN-g3_helicase
AAA_28
nSTAND3
DEAD
Mg_chelatase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AOV06060
UniProt:
A0A1D8JBJ3
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All DBs
Position
5245129..5247237
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AA seq
702 aa
AA seq
DB search
MDLFHERPGGEPPGDDSPGAVPPDTNEVLALLRRWADAGLLRRLDAALASFVAGQDAQAG
PALLVAAALLAQMEGRGHSCLPLAPLAGHPNDVLAWPADALPAQQALWQMLPARLSGWVA
ALSASPVVRVVHGEQVDGQGGSEDLGQPLVLAGADGPAPLLYLRRYWDYERAVAAHVIQR
TAAQAVAGQPLDEALARHWLDRLFPPAADGGAVDWQKLACALALRGRLSVITGGPGTGKT
YTAARLLALLFATAPDAGQLRVALAAPTGKAAARLKQSIDGALLQLQGSMGGEIDLAGLV
QRMGAARTLHSMLGARPDTRHWGFHAGRQLDVDVLIVDEASMVHLEMMAALLEALPAGAR
LVLLGDKDQLASVEAGAVLGDLCRDAQAGRYLPDTLDYALRVAGQRLPPQFAAPDGDRAP
ALAQHTVMLRESRRFGGPIGQLAHAVNAGEAVKAQALLDAGTQAGAGSELWERQGGGVHA
VTELAVHGRGGLASYALYAQALQGRPDAAGADEAAHRAWVVAVLQAFERFRLLCAVREGD
WGVSGLNRAVEQALDAQGVIRRGGEWYAGRPVMVTRNDAQLGVFNGDIGIALPGAHQGQS
GQLLRVYFLQGDELRSVGVSRMAHVETAFAMTVHKSQGSEFEHTALVLPSRGGSVLGREL
VYTGITRARQAFSLFSEVPGLLASAVGSPTQRASGLLRWLQE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
ctggacctgttccatgaacggccgggcggcgaaccgccgggcgacgactcgccgggcgcc
gtgccgccagacaccaatgaagtgctggccctgctgcgccgctgggccgacgcgggcctg
ctgcgccggctggatgcggcgctggcttccttcgtcgccgggcaggatgcacaggccggg
cccgccttgctggtggccgccgcgctgctggcgcagatggaggggcgcggccacagctgc
ctgcccctggcgccgctggccggccaccccaacgacgtgctggcctggccggccgatgcg
ctgcccgcgcagcaggccctgtggcagatgctgcctgcgcgcctgtccggctgggttgcg
gcgctgagcgccagccccgtggtgcgcgtggtgcacggggagcaggtagatggacagggt
ggcagcgaggacctcggccagcccctggtgctggccggcgcagacggccccgcgccgctg
ctgtacctgcgccgctactgggactacgaacgcgccgtggccgcccacgtcatccagcgc
acggcggcgcaggccgtggccggccagccgctggacgaagccctggcccgccactggctg
gaccgcctgttcccgcctgcggcggacggtggcgccgtggactggcagaagctggcctgc
gcgctggcgctgcgcggccggctgtcggtgatcacgggcggccccggcaccggcaagacc
tataccgccgcacggctgctggccctgctgtttgccacggcgcccgatgccggccagttg
cgcgtggccctggccgcccccacgggcaaggcggctgcgcggctgaagcaatcgatcgac
ggggccttgctgcaattgcagggcagcatgggcggcgagatcgacctggcgggcctggtg
cagcgcatgggtgcggcgcgcaccctgcactccatgctgggcgcgcggcccgatacgcgg
cactggggattccatgcagggcggcagctggacgtggacgtgctcatcgtcgatgaggcc
tccatggtccacctggagatgatggcggcgctgctggaggcactgccggccggcgcccgc
ctggtgctgctgggcgacaaggaccaactggcttcggtggaggcgggcgccgtgctgggc
gacctgtgccgcgatgcccaggccgggcgctacctgcccgacacgctggactacgcactg
cgcgtggccggccagcggctgccgccgcagttcgcggcgcccgacggcgatcgtgcgcca
gcgctggcgcagcacaccgtcatgctgcgcgagagccggcgcttcggcggccccatcggc
cagctggcccacgccgtgaatgccggtgaggcggtgaaggcccaggccctgctcgatgcc
ggcacgcaagccggcgcaggttccgagctgtgggaacgccagggcggcggcgtgcacgcc
gtgaccgaactggccgtgcacgggcgtggcggtcttgccagctatgccctctatgcccag
gcgctgcagggccggccggatgcggccggcgccgacgaggcagcgcaccgcgcctgggtg
gtcgctgtgctgcaggccttcgagcgcttccggctgctgtgcgccgtgcgcgagggcgat
tggggcgtgtccggcctcaaccgcgcggtggagcaggccctggatgcgcagggcgtgatc
cgccggggcggcgaatggtatgcgggccgtcccgtcatggtcacgcgcaacgacgcgcag
ctgggcgtgttcaacggcgacatcggcattgcgctgccgggagcgcaccaggggcagtca
gggcagctgctgcgcgtctacttcctgcagggcgacgaattgcgctcggtcggcgtcagc
cgcatggcccatgtggagaccgccttcgccatgacggtgcacaaaagccagggctcggag
tttgagcacaccgccctggtgctgccctcgcgtggaggcagcgtgctggggcgcgagctg
gtctacaccggcatcacgcgcgcccgccaggccttctcgctgttctccgaggtgccgggc
ctgctggcctcggccgttggcagccccacgcagcgcgccagcgggctgctgcgctggctg
caggagtga
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