Delftia tsuruhatensis: BI380_26045
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Entry
BI380_26045 CDS
T04496
Name
(GenBank) cell shape determination protein CcmA
Organism
dts
Delftia tsuruhatensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIG
He_PIG
TIG_SUH
Cadherin-like
IPTL-CTERM
GspA_SrpA_N
Motif
Other DBs
NCBI-ProteinID:
AOV04542
LinkDB
All DBs
Position
complement(5671857..5676119)
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AA seq
1420 aa
AA seq
DB search
MPTNHTPRPKSASRMLSMWFAWFIGLVMALAAPAHAAVDPGIIGFGTGATPGVFSDVAPD
YNGLRFTGQWSYFAAADLQTGSPGIITSGDAITSATLDGNAIIKAANGTDRFSLARVRIH
AYGSMTQFTLAGYRGGSPVSGASVIVTKTTAMTQQFVPIDLSALADVDEVRVSNNATVGE
GGNFAFDDLAVDPFPPATPTATALSPTSGLAAGGYLVTIIGANFTNVIDSPIVTAVSFGG
TPATSFTVDSATQITATAPAGSGTVNVTVTTAGGTSVTTAANQFTYLPAPTVTSVSPNFG
PQAGGTSVVITGANLSGATAVLFGATTASYVVNSATQITATSPAGTGTVDVRVTTTGGTS
AISGADQFSYLATPTITSITPTAGPQAGGTMVTITGTNFIGTTGVNFGASAATGFTVNSA
TSITATAPPGTGTVDIRVSNSVGTSPAVAADQFTYVAAPSVTSISPTAGPTGGGTTVTIT
GTGFSTAPGTGAVRFGAATATYTVNSNTQITATAPAGSAGTVDVTVTTVGGTSATSAADQ
FTYVPAPTVTSISPTSGPTSGGTTVTITGTNFSGATAVTFGATAATGFTVNSATQITATA
PAGTGTVDVRITTVGGTSATSAADQFTYVAAPTVTSVSPTAGPTAGGTSVVITGTNLSGA
TAVTFGATAATGFTVNSATQITATAPAGSPGTVDVRVTTTGGTSATGAADQFTYVATPTV
TSISPTSGPQAGGTTVVLTGTNFSGATAVTFGATAATGFTVNSATQITATSPAGTGTVDV
RITTAGGTSATSAADQFTYVPAPTVTSISPTSGPQAGGTTVTLTGTNLSGATAVTFGATA
ATGFTVNSATQITATAPAGTGTVDVRITTAGGTSATSAADQFTYVPAPTVTSVSPASGSS
IGGTTVTLTGTNFTGATAVTFGATAATGFTVNSATQITATVPAGSAGTVDVRVTTTGGTS
ATSAADQFTYVAITVTPATLAGTPKVGVSFSETLTASGGATPYTFAMAGGSTLPTGLSLS
PAGVISGTPTAAGAFSFTVQATDSSSISGQRTYSGSVAAATVVLTPAASTLPAATLNTAY
AGQTFTASGGTAPYTYASSGTLPTGMTFNASTGVLSGTPTAAGSFTFTITATDSSTGTGA
PFTSGSTSYTLVVNSTNADLSALALSSGTLAPGFGAGTLAYTATVPNASSTVTVTATAAD
AGATILVNGAAASTPVALNVGSNTVSIEVTAQDGTTKKTYVVTVTREARQSASGSGVDLG
IANSSPTCTLTAANFTSPSAVAGSLGPLPAAFTYPQAAVDFTAKQCAPSSTLTVTLTFTS
PVPANAQLMKYDATATPKWQPFTPTISGNQVSYTIVDGGLRDDDKTVNGEFVDPVILALP
GAPAGAQSIPTLDRWGLLLLSLMAGAAGFVGMARRQRAGR
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccaaccacacccccaggcccaagtccgcttcacgcatgctgtccatgtggttt
gcgtggttcatagggttggtgatggcactggcggctccggcccatgccgcagtggacccg
ggcatcatcggcttcgggaccggcgccacgcctggcgtcttctcggatgttgccccggac
tacaacgggcttcgcttcaccggccagtggtcttatttcgctgcagcggacctgcagacg
ggcagcccgggaatcatcacgtccggcgacgccatcacctccgccacccttgacggcaac
gccatcatcaaggcggccaatggcacggaccgcttcagcctcgcacgggtgcgcatccat
gcctacggctccatgacccagttcacactcgcgggctatcgcggcggcagccccgtgtcc
ggtgccagcgtgatcgtcaccaagacgacggccatgacccagcaattcgtccctatcgat
ctgagcgcgctggcggatgtggacgaagtacgggtatccaacaatgccacggttggcgaa
ggcggcaacttcgccttcgacgatctggccgtcgaccccttcccccctgccacacccacg
gcgacggcgctgtcgcccacgagcggcctggccgctggcggatatctggtcaccatcatc
ggagccaacttcaccaacgtgatcgacagccccatcgtgaccgccgtgagcttcggcggc
acgccggcgaccagcttcacggtcgacagcgccacccagatcacggccacggcaccggca
ggatcgggcacggtgaacgtgaccgtcacgacggcaggcggcaccagcgtcactaccgca
gccaatcagttcacctatctgcccgcgcccacggtgacatccgtctcgcccaactttggc
ccgcaggctggcggcaccagcgtggtcatcaccggcgccaacctgtccggcgccaccgcc
gtgctattcggcgcgacaaccgccagctatgtcgtcaacagcgccacccagatcaccgcc
acctcgcctgcgggtacaggcacggtcgatgtgcgcgtcacaacgacgggcggcaccagc
gccatcagcggggccgatcaattcagctacctggcaacgcccacgatcaccagcatcacg
cccacggcaggcccgcaggcgggtggaacgatggtcaccatcacgggcacgaacttcatc
ggcaccacgggcgtgaacttcggcgcctcggcagcgaccggcttcacggtcaacagcgcc
accagcatcacggccacggcgccgcccggaacgggcacggtggacatccgcgtcagcaac
tccgtcggcaccagtcccgccgttgccgctgaccagttcacttatgtggcggcaccgtcg
gtcacctccatctcgcccacggcaggtcccaccggcggcggcaccacggtgaccatcacc
ggtaccggtttctcaacagctcctggcaccggcgccgtgcgcttcggcgccgcaaccgcc
acctacaccgtcaacagcaacacccagatcaccgccaccgcgcccgcaggcagcgccggc
acggtcgatgtgacggtgaccacggtgggcggcaccagtgccaccagcgcagccgaccag
ttcacctatgtgcccgcgcccacggtgacttccatctcgcccaccagcggcccgaccagt
gggggcaccacggtgaccatcaccggcaccaacttctccggcgccacggccgtgaccttc
ggcgccacggccgccacaggcttcacggtcaacagcgccacgcagatcacggccacagcg
cctgccggcacgggcacggtagacgtgcgcattaccaccgtgggcggcaccagcgccacc
agtgcggccgaccagttcacctacgtggccgcacccacggtgacttccgtctcgcccacg
gcagggcccaccgcaggaggaacctcggtggtcatcaccggtaccaacctctccggcgcc
acggccgtgaccttcggcgccacggccgccacgggcttcacggtcaacagcgccacgcag
atcacggccaccgcgcctgcagggtcgccgggcacggtcgatgtgcgcgtcaccacgact
ggcggcaccagcgccaccggcgcggcagaccagttcacctacgtggccacgcccacggtg
acctccatctcgcccaccagcggcccgcaggcaggcggcaccactgtggttcttaccggc
accaacttctccggcgccacggccgtgaccttcggcgccacggccgccacgggcttcacg
gtcaacagcgccacgcagatcacggccacatcgcctgccggcacgggcacggtcgatgtg
cgcatcaccaccgcgggcggtacaagcgccaccagcgcagccgaccagttcacctatgtg
cctgcgcccacggtgacctccatctcgcccaccagcggcccacaagcgggcggcaccacg
gtgaccctgaccggcaccaacctgtccggcgccacggccgtgaccttcggcgccacggcc
gccacgggcttcacggtcaacagcgccacgcagatcacggccaccgcgcctgccggcacg
ggcacggtagacgtgcgcatcaccaccgcaggcggtactagcgccaccagcgcggccgac
cagttcacctatgtgcctgcgcccacggtgacttccgtctcgcccgcaagcggttcttcg
attggtggcaccacggtcaccctgaccggcacgaacttcaccggcgccacggccgtgaca
ttcggcgccacggccgccacgggcttcacggtcaacagcgccacgcagatcacggccaca
gtgcctgcaggatcggcgggcacggtcgatgtgcgcgtcacaacgaccggcggcaccagc
gccaccagcgcggccgaccagttcacctatgtggccatcacggtgacgcccgcgacgctg
gccggcacgcccaaggtaggcgtctcgttcagcgagaccctgaccgccagcggcggcgca
acgccctacacctttgcaatggccggcggcagcacgctgcccacaggcctgtcgctgtcg
cccgccggggtgatcagcggcacgcccacggcggccggggccttcagcttcacggtgcag
gcgaccgacagcagcagcatcagcggccagcgcacctacagtggcagcgtggcggcagcc
acggtggtgctgacgcctgcagcttccacgctgccggccgccacgctgaacacggcctat
gcaggacagaccttcactgccagcggaggcacggcgccctacacctacgccagcagcggc
acgctgccgaccggaatgacgttcaacgccagcaccggtgttctgagcggcacgcccacc
gcggcgggaagcttcaccttcaccatcacggccacggactcctccacgggcacgggtgct
ccgttcacctcgggcagcaccagctacaccctggtggtgaactccaccaacgccgacctc
agcgccctggcactgagcagcggcacgctcgcaccgggctttggtgcaggcaccctggcc
tacacggccaccgtgcccaacgccagcagcaccgtcacggtgacggccaccgcagccgat
gcgggcgccacgatcctggtcaacggcgcagcggcctccaccccggtggcgctgaatgtg
ggcagcaataccgtgtccatcgaagtcacggcgcaggacggcacgaccaagaaaacctat
gtggtgacggtgacgcgcgaggccaggcaaagcgcatcgggctcgggcgtggatctgggc
attgccaacagcagtcccacctgcacgctgactgcggccaacttcacctcgccttctgcc
gtggccggctcgctgggcccgctgccggcggccttcacctacccgcaggccgccgtggac
ttcacggccaagcagtgcgcccccagcagcacgctgaccgtgaccctcaccttcacgtcc
cccgtgcccgccaacgcgcagctgatgaagtacgacgccaccgcaacgcccaagtggcag
cccttcacgcccaccatcagtggcaaccaggtcagctacaccatcgtggacggcggcctg
cgcgatgacgacaagacggtcaacggcgagttcgtcgatcccgtcatcctggccctgcct
ggagcccccgcaggagcgcagagcatccccacgctggaccgctggggcctgctgctgctg
tcgctgatggcgggagccgccggcttcgtgggcatggcacgcaggcagcgcgccggacgt
taa
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