Delftia tsuruhatensis: BI380_29345
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Entry
BI380_29345 CDS
T04496
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dts
Delftia tsuruhatensis
Pathway
dts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BI380_29345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dts03019
]
BI380_29345
03016 Transfer RNA biogenesis [BR:
dts03016
]
BI380_29345
Enzymes [BR:
dts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BI380_29345
Messenger RNA biogenesis [BR:
dts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BI380_29345
Transfer RNA biogenesis [BR:
dts03016
]
Prokaryotic type
tRNA degradation factors
BI380_29345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
DUF5813
KH_KhpA-B
S1_2
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AOV05145
UniProt:
A0ABN4SQN7
LinkDB
All DBs
Position
6429474..6431735
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AA seq
753 aa
AA seq
DB search
MSIFNKVTKTFQWGQHTVTMETGEIARQASGAVLVNIDDTVVLATVVASKQAKSGQDFFP
LTVDYIEKTYAAGKIPGSFFKREAKPSELETLTSRLIDRPIRPLFPEGFYNDVHVVIHTV
SLNPEVDADIAALIATSAALSVSGIPFNGPIGAARVGYINGEYVLNPGQTQRKDSQMDLV
VAGTEAAVLMVESEAQQLPEDVMLGAVVFGHEQGRIAIDAIHELVREAGKPVWDWVAPAK
DEELIAKVAALGDEALRAAYQIRNKQSRTQACREAYAAVKAGLTAQGVEFDGVKVEGMLF
DIEARIVRSQILAGEPRIDGRDTRTVRPIEIRNSVLPRTHGSALFTRGETQALVVSTLGT
ERDAQRIDALAGEFEDRFLFHYNMPPFATGEVGRMGSTKRREIGHGRLAKRALAACLPSK
EEFPYTIRVVSEITESNGSSSMASVCGGCLSMMDAGVPMKAHVAGIAMGLIKEDNRFAVL
TDILGDEDHLGDMDFKVAGTTSGITALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQ
EAMGEAKAEISSFAPKLYTMKINPEKIRDVIGKGGSTIRALTEETGTQIDIGEDGTITIA
SSDVAKADEAKRRIEEITAEVEIGKIYEGPVTKILDFGALVNLLPGKDGLLHISQIAHER
VERVADYLQEGQIIKVKVMETDEKGRVKLSLKALTERPAGMERSERPAPAEREFRQPREP
RQQREYREPREPREPRDGGRPAAEGEQQQQQQQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcttcaacaaagtcaccaagaccttccagtggggccagcacacggtcaccatg
gaaaccggcgagatcgcccgccaggcttccggcgccgtgctggtcaacatcgatgacacc
gtggtgctggccaccgtggtggcgtccaagcaggccaagtccggccaggacttcttcccg
ctgaccgtcgattacatcgagaagacctacgccgcaggcaagatccccggcagcttcttc
aagcgcgaagccaagcccagcgaactcgaaaccctgaccagccgcctgatcgaccgcccg
atccgcccgctgttccccgaaggcttctacaacgacgtgcatgtggtcatccacaccgtg
tcgctgaaccccgaagtcgatgccgacatcgccgccctgatcgccacgtcggccgccctg
tccgtgtcgggcattccgttcaacgggcccatcggtgcagcccgcgtgggctacatcaat
ggcgagtacgtgctcaaccccggccagacccagcgcaaggattcgcagatggatctggtc
gtggccggtactgaagctgccgtgctgatggtggagtccgaggcgcagcaactgcctgaa
gacgtgatgctgggcgccgtggtcttcggccacgagcaaggtcgcatcgccattgacgcc
atccatgaactggtgcgcgaagccggcaagcccgtctgggactgggtcgctcccgccaag
gatgaagagctgatcgccaaggtggccgcactgggtgacgaagccctgcgcgcggcctac
cagatccgcaacaagcaaagccgcacgcaggcctgccgcgaagcctacgccgccgtgaag
gccggcctgacggcccagggcgtggagttcgacggcgtcaaggtcgaaggcatgctgttc
gacatcgaggcacgcatcgttcgcagccagatcctggccggcgagccgcgcatcgacggc
cgcgacacgcgcaccgtgcgtcccatcgaaatccgcaactccgtgctgccccgcacgcac
ggctcggccctgttcacgcgcggcgagacgcaggccctggtcgtgtccacgctgggcacc
gagcgcgatgcacaacgcatcgacgcgctggccggcgagttcgaggaccgcttcctgttc
cactacaacatgcctccctttgccaccggcgaagtgggccgcatgggctcgaccaagcgc
cgcgaaatcggccacggccgtctggccaagcgcgccctggcggcctgcctgcccagcaag
gaagaattcccctacaccatccgcgtggtgtcggaaatcaccgagtccaacggctcctcg
tccatggcctcggtctgcggcggctgcctgtcgatgatggatgcaggcgttccgatgaag
gcccacgtggccggtatcgccatgggcctgatcaaggaagacaaccgcttcgccgtgctg
accgacatcctgggtgatgaagatcatctgggcgacatggacttcaaggtggctggcacc
accagcggcatcactgcgctgcagatggacatcaagatccagggcatcaccaaggaaatc
atgcaggtcgccctggcccaggccaaggaagcgcgcatgcacatcctgggcaagatgcag
gaagccatgggtgaagccaaggccgagatctcgtccttcgctcccaagctgtacacgatg
aagatcaaccccgagaagatccgtgacgtgatcggcaagggcggctccaccatccgtgca
ctgaccgaagagaccggcacgcagatcgacatcggcgaagacggcaccatcaccatcgct
tccagcgatgtcgccaaggccgacgaagccaagcgccgcatcgaagagatcacggccgaa
gtcgaaatcggcaagatctacgaaggcccggtcaccaagatcctggacttcggtgctctc
gtgaacctgctgcccggcaaggacggtctgctgcacatcagccagattgcccacgagcgc
gtggagcgcgtcgccgactacctgcaggaaggccagatcatcaaggtcaaggtcatggag
accgacgaaaagggtcgtgtcaagctgtcgctgaaggcgttgaccgagcgtcctgccggt
atggagcgcagcgagcgccccgcgcctgccgagcgtgagttccgccagccgcgtgagccc
cgccagcaacgcgagtaccgcgagccgcgtgaacctcgcgagccccgtgacggcggccgt
ccggctgccgagggcgagcagcaacagcaacagcagcagtaa
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