Dictyoglomus turgidum: Dtur_0884
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Entry
Dtur_0884 CDS
T00800
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dtu
Dictyoglomus turgidum
Pathway
dtu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dtu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dtur_0884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtu03400
]
Dtur_0884
DNA repair and recombination proteins [BR:
dtu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dtur_0884
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dtur_0884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF4795
AAA_22
Microtub_bd
HEM4
P-loop_SecA
MEDS
SWI2_SNF2
Kinesin
DUF87
V-SNARE
Motif
Other DBs
NCBI-ProteinID:
ACK42165
UniProt:
B8E082
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All DBs
Position
911282..913270
Genome browser
AA seq
662 aa
AA seq
DB search
MSGFILVSEFKPCGDQPQAIEKLTEGVKRGLRYQTLIGVTGSGKTFTMANIIANVQKPTL
VIAPNKTLAAQLYSEFKEFFPYNAVEYFVSYYDYYQPEAYIPQTDTYIEKDADINDRIDR
LRHSTTSSLLSRRDVIVVASVSCIYGLGSPMDYAEMILRVKRGEDLPRETLLRKLIKLQY
ERNDYEFTRGKFRVRGDIVEVFPIGGETAIRVEYWGDNIERISEIDPLNGKRIIDFNEVF
IYPATHYIAPTEKMERAIESIKRELTERLEELRAQGKFLEAKRLEARTLYDIELLREVGY
CKGIENYSRHFDGRKPGEPPYTLLDYFPDDFLVFIDESHLTIPQLRAMYHGDKSRKDNLV
EYGFRLPSAYDNRPLTFEEFWERVPQVIFVSATPAEFELSVSEQVVEQLIRPTGLLDPEI
EVHPTEGQIDHLISEIKKVVARGERVLVTTLTKRTAEDLAEYLSNLGINVTYLHSEIETL
ERTGILQNLRLGKFDVLVGINLLREGLDLPEVSLVAILDADREGFLRSERSLIQVMGRAA
RNVNGKVIMYADVITESMRKAIQETERRRKIQMEYNKAHGIIPKSIKKPVKEVFDFVEAV
AEKKADYRAISKKLSIDEIEEVIRQLEKEMYEAAAELDFEKAAYLRDQIKELKNELRKKT
KL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatttatattagtatcagaatttaaaccctgtggtgatcaacctcaggcaata
gagaagcttactgaaggagttaagaggggtcttagatatcagacccttataggggttact
ggttctggaaagacttttaccatggcaaatattattgcaaatgttcagaagcctaccctt
gttattgcgcctaataagacccttgctgcgcagctttatagtgaattcaaagagtttttc
ccatataatgcagtggaatattttgtgagttattatgattattatcagcctgaagcctat
attccgcagactgatacctatattgaaaaagatgcggacattaatgatagaatagataga
ctaagacatagtactacaagttccttgttgtcccgaagggatgtaatagtagttgcgagt
gtttcgtgtatttatggtttaggttcccctatggattatgcagagatgattcttagagta
aaaagaggagaagatttaccaagagagactttgcttagaaaacttattaagcttcagtat
gaaagaaatgattacgaatttacccgaggaaaatttagagtgaggggagatatagtggag
gtatttccaatagggggagagactgctataagagttgagtactggggagataatattgaa
agaatctccgagattgaccctttaaatgggaaaagaattattgattttaatgaggttttt
atatatcctgcaactcactatatagcacctacagaaaaaatggaaagagctatagagtca
ataaagagggaacttacagagagacttgaggaattaagagctcagggtaaattcctggaa
gcaaaaaggcttgaagcgagaactctatatgatattgagcttttaagagaagtgggctat
tgcaagggaattgaaaactattcaaggcattttgatgggagaaagccaggagaacctcct
tacactcttcttgattattttcctgatgactttcttgtatttattgatgagtctcatctc
actattcctcaactccgggccatgtaccatggagataagtcaaggaaggacaatttagta
gaatatggttttagattaccctctgcctatgataacagaccattaacctttgaggaattc
tgggagcgagttccacaagtaatttttgtttctgctactcctgcagagtttgaactttcg
gtttcagaacaggttgtagagcaacttataaggcctactggccttcttgatcctgagata
gaagtacatcctactgagggacaaatagatcatttgatatctgagataaagaaggtggtg
gctcgaggagaaagagtacttgttactactcttactaagagaactgcagaggatcttgct
gagtatctttcaaatcttggtattaatgtaacttatttgcattctgagatagaaacctta
gaaagaacaggaattttacagaatttaaggcttggaaaatttgatgttcttgtggggata
aacctattgagggaggggcttgatcttcctgaagtgtcccttgtagcaattcttgatgca
gatagggagggatttttgagatccgaaagatctcttattcaggttatgggaagggctgca
aggaatgtaaatggaaaagtaataatgtatgccgatgtaatcactgaatccatgagaaag
gctattcaagagacggaaagaagaaggaagatacagatggaatataataaggctcatggg
ataattccaaaatccattaagaaaccagtaaaagaggtctttgattttgttgaagcagta
gcagaaaagaaagctgattacagagcaatctctaagaagttatccatagatgaaattgaa
gaggtaataagacagcttgaaaaagagatgtatgaggcagcagcagaacttgattttgaa
aaggctgcatatttaagggatcagattaaagagttaaaaaatgaattgagaaagaagaca
aaattatga
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