Dictyoglomus turgidum: Dtur_0975
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Entry
Dtur_0975 CDS
T00800
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dtu
Dictyoglomus turgidum
Pathway
dtu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dtu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dtur_0975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtu03021
]
Dtur_0975
03400 DNA repair and recombination proteins [BR:
dtu03400
]
Dtur_0975
Enzymes [BR:
dtu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dtur_0975
Transcription machinery [BR:
dtu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dtur_0975
DNA repair and recombination proteins [BR:
dtu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dtur_0975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
Biotin_lipoyl
PmbA_TldD_2nd
Motif
Other DBs
NCBI-ProteinID:
ACK42255
UniProt:
B8E1C7
LinkDB
All DBs
Position
1005689..1009972
Genome browser
AA seq
1427 aa
AA seq
DB search
MKIKDFDKLVFGLASPEDILSWSYGEVKKPETINYRTFKPERDGLFCEKIFGPVKDYECH
CGKYKGQRYEGITCDRCGVTVTKSSVRRERMGHIKLAVPVVHIWYFKNVPNYIGLLLNIS
SKQLEEVIYYHSYIVLDPGDTPLQKMQVLTEDEYEKALNEFGNSFKVGMGAEAIKKLLRD
LDLEELSYDLKKQINEIQGQKKAKLIKRLEIVESFRLSGNKPEWMVLEVLPVIPPDLRPM
VQLEGGKFATSDLNDLYRRVINRNNRLAKLLEINAPEIIVRNEKRMLQEAVDALIDNGRR
GKPVTNASGRPLRSLSDILEGKQGRFRQNLLGKRVDFSGRAVIVVGPELKLHQCGLPKKM
ALELFKPFVINKLIEHGYATNVKNARKKVEREASEVWDVLDEIIKEKLVLLNRAPTLHRV
SIQAFEPKLIDGNAIQLHPLVCPPYNADFDGDQMAVHVPLSLEAQAEARILMLSSNNLIS
PAHGKPLTLPTQDVVLGLYYLTIMVPGREIEDKRFATPEEVLLALEEKKVDLHSKIYVHK
RGIEETYNISLPESPMFIETTPGRLILNEIVPEKLRYYNVTMNRREIRKIVEKCFEIYGW
SKTAEFLDELKRLGFEYATKAGVSFSIVDIEIPKEAKEKVIKKAEEESMLLQKAVESGLY
SEEERYQRAIEIWTKATEEVKDIMLANFGILNSVYMMAFSGARGNVDQVRQLAAMRGLMA
DPSGQIMDIPIKSSFYEGLTVSEHFISSYGARKGVVDTALRTSDSGYLTRRLVDVAQSLV
IREEDCGTEDGIYVEPLEDEGKIVLSLKDRIIGRFAAEDVYNDKGELIIAKNEYIDVEKA
KLVERFGIKRVKIRSPMTCKSEKGICQKCYGEDLATHRLVNIGEAVGVIAAQSIGEPGTQ
LTMRTFHTGGVALTSLNYQNIQFRVTGRVDFLNLKLKERFEVLGKKEKMVVGRNGRAVVK
GEGEEEIVLPPGTIVSIDSGTDVTKGMSLGYIDPNLRYIASPFTGKVIRVEKVGESYNKK
FTFLNVKYDRDLNNYELSYNEEAHPIFCSVVLLDETGNEKRIELPEGVAFLFKIGDFINE
GDIIAEYSRETMKIQACEEGKVVDILERNGEIIDRIVATGEAVIIIRNSEGREVEYRIPR
GLKLHVNAEDNVEFGTILAYFPAYQQKTAKTEDIVQGLPRVEELFEARKPKGKSIIAGVS
GIVKITRTKSGEKIVIEGENGKDEHILPPNAQLLVKEGDYVTVGQELTKGYRNPAEILAN
EGLAAVQRYIVDEVQKVYLKQGAEINDKHIEVIVRQMTNRVRIEDPGDSNFLFGQLVNKV
TFEKVKQQLEEEGKRPPIAREVVLGITKAALTTESVISAASFQETTRVLAEAAVKGKEDY
LEGLKENVIIGRLIPAGTGLFRKIIPQKVSAKKVEVLEDGGEIEINS
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
ttgaagataaaagattttgataaattagtttttggtttagcatcaccagaagatatttta
agttggtcttacggtgaagttaagaaaccggagactattaattatagaaccttcaaacct
gaaagagatggacttttttgtgagaagatctttggacctgtgaaggattatgagtgtcat
tgcggtaagtataaagggcaaagatatgaaggtataacttgtgatagatgtggtgtcaca
gtaactaagagctcagtgagaagagagagaatgggacatataaaacttgctgtacctgta
gtacatatttggtattttaaaaatgttcctaactatatagggctacttcttaatataagc
agtaaacaacttgaggaagtaatttattatcattcatatattgtgttagatccaggggat
actcctttacagaaaatgcaggttttaacagaagacgaatatgaaaaagctcttaatgag
tttggtaatagttttaaagtaggaatgggtgcagaagctattaaaaagcttttgagagat
ttagatttagaagaattgtcttacgacttaaaaaaacaaatcaacgaaatacaaggtcag
aaaaaggcgaaacttatcaaaagattagagattgtagaaagttttaggctttctggtaat
aaacctgagtggatggtacttgaggtacttcctgttattcctcctgatttgaggcctatg
gtacaacttgaaggtggcaaatttgccacttctgatcttaatgatctttataggagagtt
attaacagaaataaccgtcttgcaaagcttttagaaataaatgccccagagattattgtt
agaaatgaaaagagaatgttgcaagaagcagtagatgctcttattgataatggaagaagg
ggtaagcctgtgactaacgctagtggaagacccttgaggtctttatcagatatcttagag
ggtaaacaaggaagattcagacagaatcttttaggaaaaagagttgacttttctggaaga
gcggttattgtggttggacctgaattaaaattacatcaatgtggacttcctaaaaagatg
gctttagaattatttaaaccttttgtaataaacaagttaatagaacatggatatgctact
aacgtaaagaatgcaagaaaaaaagttgaaagagaagcctctgaggtatgggatgtttta
gatgaaattattaaggaaaaattagtacttttaaatcgtgctcctactttgcacagagtt
agtatacaggcatttgagcctaagttaattgatggtaatgcaattcaattacatccctta
gtatgtccaccgtataatgctgacttcgatggggaccagatggcggttcatgtgccacta
tcccttgaggcccaagcagaagcaagaattttgatgttgtcatccaataaccttatatct
ccagctcatggaaaacctcttaccttaccaactcaggatgtggttcttggactttattat
ttaactataatggtacccggaagagagattgaggataaaagatttgcgaccccggaagag
gttttgttggctttagaggagaaaaaagttgatctacattcaaagatatatgtccacaag
agaggaatagaagaaacatataatatatctttacctgagagccctatgtttatagagact
acaccaggaaggttaattttgaatgagattgttcctgagaagttaagatattacaacgtc
actatgaatagaagagaaattagaaaaattgtcgaaaaatgttttgagatttatggttgg
agcaagacagcagaattcttagacgaacttaaaagacttgggtttgaatatgctacaaaa
gcaggtgtaagtttttccatagtagatattgaaatacctaaggaggcaaaagagaaggtt
ataaagaaagcggaagaggagtctatgcttcttcaaaaagctgtagagagtggtttgtat
tctgaggaagaaagatatcaaagagctattgagatatggacaaaggcaactgaagaagta
aaggatataatgcttgctaattttggtattttaaattctgtgtatatgatggcgttttct
ggtgctagaggtaatgtggaccaggtaagacagcttgcagcaatgagaggtttgatggct
gatccgtcaggacaaattatggacatacctattaagtcaagcttctacgaaggtttaact
gtatcagaacattttatttcttcttatggagcaaggaagggagtagtggacacagcattg
agaacttctgattcaggatacttaaccagaagacttgtagatgtagctcaaagtctggtt
attagagaggaagattgtggtactgaggatgggatatatgtagagcctctggaggatgaa
gggaaaatagtattaagcttgaaggatagaatcataggaagatttgctgctgaagatgtt
tataatgataaaggagaattaattattgctaagaatgagtatatagatgtggaaaaagca
aaattagtggagaggtttggtataaagagggtaaagatcagatctcctatgacttgtaag
agtgagaaagggatatgtcaaaaatgttatggggaggatttagcaactcataggcttgtt
aacataggagaagcggtaggagtaatagctgcccaatctattggagagcctggaactcag
cttactatgagaaccttccacacaggtggtgttgctttaacttctttgaattatcagaat
attcaatttagagtgacaggaagggttgattttttgaatttaaagttaaaagaaagattt
gaagtcttgggtaaaaaagaaaaaatggtagttggacgtaatggaagagcagttgttaaa
ggagaaggcgaagaagaaattgtacttccaccaggaaccattgtgtctatagattctgga
accgatgttactaagggaatgagtttaggatatatagatcctaatttaagatatatagct
tcaccatttactggaaaggttataagagttgaaaaggtaggagaaagttacaataaaaaa
tttacttttctcaatgtgaaatacgatagagatcttaataattatgagttgtcttataac
gaagaagcacatccgattttctgttctgtagtgttgttggatgaaactggtaatgagaaa
agaatagaattaccggaaggtgtggcatttctctttaaaattggagactttattaatgaa
ggagatataattgccgaatatagtagagagaccatgaagattcaggcttgcgaagaagga
aaagtggtagatattcttgagagaaatggagaaataatagatcgaattgtggcaacaggt
gaagctgtaattatcataagaaatagcgaaggaagagaagttgaatatagaattcctcgt
ggacttaaattacatgtaaatgcagaagataatgtagaatttggcactattcttgcttac
ttccctgcataccaacagaaaactgcaaaaacagaagatatcgttcaaggtcttcctcgt
gtagaggagttgtttgaggcaaggaaaccaaaaggaaaatctattatagctggtgttagt
ggtattgtgaaaataacaaggactaaatcaggagaaaagatagtgattgaaggagaaaat
ggaaaagatgagcatatcttgccacctaatgctcaacttttggttaaagaaggcgattat
gtaacagtgggacaagagttgactaaaggatatagaaatcctgcggaaattcttgctaat
gaaggtcttgctgctgtacagagatatattgtggatgaagtgcaaaaggtttatctcaaa
caaggagcagagattaacgataagcacatagaagtaatagttagacagatgactaataga
gtaaggattgaagatccaggagatagcaacttcttgtttggtcaacttgttaacaaagtg
acctttgaaaaggtgaaacagcaattagaagaagaaggaaaaagacctcctatagcaaga
gaggttgtacttggtattacaaaagcagccttaaccacagaaagtgtaatatctgcagct
tctttccaagagactacgagggttttagctgaagcagcagttaaaggaaaagaagactac
ctggagggattaaaagaaaatgtgataataggcagattaattcctgcaggcacagggctc
tttaggaaaattattcctcaaaaagtctccgctaagaaagtagaggttttggaagatggt
ggagaaattgaaattaactcttga
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