Dictyoglomus turgidum: Dtur_1602
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Entry
Dtur_1602 CDS
T00800
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dtu
Dictyoglomus turgidum
Pathway
dtu03410
Base excision repair
dtu03430
Mismatch repair
dtu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dtu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dtur_1602
03430 Mismatch repair
Dtur_1602
03440 Homologous recombination
Dtur_1602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtu03400
]
Dtur_1602
DNA repair and recombination proteins [BR:
dtu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Dtur_1602
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Dtur_1602
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Dtur_1602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACK42875
UniProt:
B8E2N1
LinkDB
All DBs
Position
complement(1618744..1621215)
Genome browser
AA seq
823 aa
AA seq
DB search
MRRWVFLFEENKGQEEVLARKLGISSLLARLLLNRGISEPSKAKKFLNPKIEDLYDPFTY
FPDLEKAIDFLIKLRNAKRKILVFGDYDVDGITATTLMYRVLSHWGWDVSFYVPHRLDEG
YGLKEKSVKKALSQNEFIGLLITVDCGIKSKKEVEYLKKNGVEVIITDHHIPEEGSIPEA
LLVLDPYLNNYPYPYMAGVGVAFKFLKALGDAIGKDIYKEKGVLELVTLGTLGDLMELKD
ENRVLVRYGLEKILNSDLVGVRTLIRKVGLDKNTFISSKDIIFNITPRINAIGRFKEVEE
AIRLFLTENVEEAEILFDKLDEFNRKRKEEVERVYEMAKEMLREEDIENNKAVFLYNSLW
GRDVGGVMGIVASMLVEEYNVPFFLGRKEGEFIVFSGRGVEDVNLFEFVSKLSDYLINFG
GHKGAVGFSLFEKDYEDFKNSAVRLANEIWKELDFTPKVKIDAEIPLDKIKSENIGKFLS
ELDMLSPFGPGNEEPRFKINSTVIAYFEKMGNGGRYKIKIGDISGKILSTPIFSLGIEEE
ALKESPQTVDIVLRIEKEGYQGREYFNFYLEEWREAEKKEKEEKREKIRAILYFLENDTE
KTFLIEEIKKRGREYAIISPYWNKVYWNEEIVSPWDFSIDLSKDKVIIWDDAEWFLNEEF
YERFLVKIRNINNPIIFLSNLKKEEKRLNLSDILGIKNLRIPKKSFNPAFIDVRFSKNKE
KDLQFFEGKDVYFYPNKVPIRMYRYLIFLKPPLTEVEFVRWSKFGQNIVLLFGKEDFIYS
YKKVQEVSMGLLKEEREFFVTQSHNFLLFLQKARPSEIYSLLV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagaagatgggttttcctctttgaggaaaataaagggcaggaagaggttttggcaaga
aagcttggaatatcatctcttcttgcccgactccttttgaatcgaggaataagtgaacct
tcaaaggcaaaaaaatttttaaatcctaagatagaagatttatatgatccttttacttat
tttcccgatttagaaaaggctatagatttcttaattaagctaagaaatgctaagagaaag
atacttgtttttggagattatgacgtagacggaataactgctacaacccttatgtataga
gttttatcccattgggggtgggatgtaagtttttatgtgcctcatagactggatgaaggg
tatgggttaaaggaaaaaagtgttaaaaaagcgttatctcaaaatgagtttataggtcta
ttaattactgtggattgtgggattaaaagtaaaaaagaggttgaatatttaaagaaaaat
ggagttgaagttattattactgatcatcatattcctgaggaaggaagtattccagaagct
cttcttgtgcttgatccttacttaaacaattatccctatccatatatggcaggagttgga
gttgcttttaagttcctaaaagccctgggagatgcaatagggaaagatatttataaagaa
aagggggtattagaattagtaaccttaggaaccttgggagacttaatggagcttaaagat
gagaatagggtccttgttagatatggtcttgagaagattttaaattccgatcttgtagga
gttagaactcttattagaaaagtagggcttgataaaaatacttttataagttcaaaggat
attatttttaatataactccaaggataaatgccataggtagattcaaagaggtagaagaa
gcaataagactatttcttactgaaaatgtagaagaagctgagatactttttgataaactt
gacgaatttaataggaaaagaaaagaagaggtagaaagagtttacgagatggcaaaagag
atgttaagagaggaggatatagaaaataataaagcagtatttttatacaatagtttgtgg
gggagagatgtgggtggggtaatgggaattgtagcttctatgcttgtagaagaatataat
gtgcccttctttcttggaagaaaagaaggagagtttattgtcttttcagggagaggagta
gaagatgtaaatttatttgaatttgtctctaagttatcagactatttaataaactttggt
ggacataaaggagctgttggtttttctctgtttgaaaaagactatgaggattttaagaat
agtgcagtaaggcttgcaaatgaaatttggaaggaattagattttactccaaaggttaag
atagatgctgaaattcctttagataagattaaaagtgaaaatattggtaagtttctttct
gagcttgatatgctttcgccttttggtccaggtaatgaagaaccaaggttcaaaataaat
tcaacggttattgcatattttgaaaaaatgggaaatggaggaagatataagattaaaatt
ggtgatatatcgggaaaaattttgtcaactcccattttttctcttggaatagaggaagaa
gcgctaaaagagtctcctcaaacagtggatattgtcttgagaatagaaaaagagggatat
caaggtagagaatatttcaatttttatttggaagaatggagagaggctgaaaagaaagag
aaagaagaaaagagagaaaagataagggcaattttgtattttcttgagaatgatacagag
aagacttttcttatagaggaaataaaaaagagaggtagagaatatgctattatttcccct
tactggaataaagtttattggaatgaagagattgtgtctccatgggatttctctatagat
ctttcaaaagacaaagttatcatctgggatgatgcagaatggtttttaaatgaggaattt
tatgagaggtttttggtaaagataagaaatataaataatcctatcattttcctttctaat
cttaagaaggaagaaaaaagattaaatttgtccgatatacttggtattaagaatttgcga
ataccaaaaaagtcttttaatcctgcttttattgatgttagattttcgaaaaataaggaa
aaggatttacagttttttgagggaaaagacgtgtacttctatcctaataaagtacctata
aggatgtatagatatttgatttttctcaagcctccgttgacagaagtagaatttgtaaga
tggtcaaaatttggccagaatatagttcttctatttggaaaggaagattttatatacagc
tataagaaggtgcaagaagtttctatgggactattgaaagaagagagagaattttttgtt
actcaatctcataattttctcctctttcttcagaaggcacgaccatcggagatatattct
cttcttgtgtaa
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