Dictyoglomus turgidum: Dtur_1612
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Entry
Dtur_1612 CDS
T00800
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
dtu
Dictyoglomus turgidum
Pathway
dtu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dtu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dtur_1612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtu03400
]
Dtur_1612
Enzymes [BR:
dtu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dtur_1612
DNA repair and recombination proteins [BR:
dtu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dtur_1612
RecFOR pathway proteins
Dtur_1612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RuvB_C
AAA_lid_4
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
MCM
DUF815
AAA_14
Sigma54_activat
AAA_16
AAA_2
ResIII
nSTAND3
AAA_18
HTH_AsnC-type
IstB_IS21
AAA_3
AAA_17
Sigma54_activ_2
NTPase_1
NB-ARC
AAA_33
ABC_tran
AAA_28
AAA_25
AAA_PrkA
RsgA_GTPase
RNA_helicase
TsaE
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ACK42885
UniProt:
B8E2P1
LinkDB
All DBs
Position
complement(1628499..1629503)
Genome browser
AA seq
334 aa
AA seq
DB search
MKVKRFPYFSLVQREPALDNVLRPKNLSDFIGQERIKDRLALIINAAKKREEAVDHILFV
GPPGVGKTTLALIIAEEQNAPIKMVSAPSLQKSGDLIALLTSVEERGIIFIDEIHRLNPS
LEEILYSALEDRSVSIVTGKGPGGKVLSIKLPPFTLVGATTRPALLSSPLRDRFGFIANL
DFYTHEEMVKIIERSQKILGLNLPYESIIEIAKRSRGVPRIANRILKRIKDYIDLKEEKN
INLEETKRVLELIGIDEKGLDELDRKILFALRDKFSGGPVGLKALAAVLNESPDTIESIY
EPYLLRIGFIQRTSRGRIITPLGLAHIMGCKNDG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaaaagatttccctacttttctcttgttcaaagagaaccagcccttgataat
gtattaagaccaaagaatctatcagattttataggacaagaaaggataaaagatagatta
gctttaataattaatgctgctaaaaaaagggaagaggctgtagatcacattctttttgta
ggtcctcctggagtaggaaagacgacccttgctttgatcatagcagaagaacaaaatgcc
cccataaaaatggtatctgcaccatctttacaaaagagtggcgatttaatagctttgctt
acaagtgtagaagagaggggcattatttttatagacgagattcataggttgaatccctcc
ttggaagagatactttattctgctttagaggataggagtgttagtattgtaactggaaag
ggtcctggaggtaaagttttaagcataaaacttccccccttcaccttagtaggtgcgact
acaagacctgccttgcttagcagtcctttgagagatcgctttggatttatagcaaattta
gatttttatacccatgaagaaatggtgaagattattgaaaggtctcaaaaaattcttggt
ttaaatcttccctatgaatccataattgagattgctaaaagatcaagaggtgttcctcga
attgctaacagaattttgaaaagaataaaagattatatagatctgaaagaagaaaaaaat
attaacttagaagaaactaagagggtacttgaattaattggtatcgatgaaaaggggctt
gatgagttggataggaagattctttttgcccttagggataaattttctggtggtcctgtg
ggattaaaagcccttgcagcagtactcaacgaatctccagatactattgaatccatatat
gaaccttatcttttaagaattggctttattcaaaggacatcaagaggaaggattataacc
cctcttggtttagctcatataatggggtgtaagaatgacggataa
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