Dyella thiooxydans: ATSB10_00800
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Entry
ATSB10_00800 CDS
T04308
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
dtx
Dyella thiooxydans
Pathway
dtx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ATSB10_00800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtx03400
]
ATSB10_00800
Enzymes [BR:
dtx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
ATSB10_00800
DNA repair and recombination proteins [BR:
dtx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ATSB10_00800
Prokaryotic type
ATSB10_00800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
DUF6308
HHH_5
NUDIX
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AND67534
UniProt:
A0A160MX55
LinkDB
All DBs
Position
complement(92835..93911)
Genome browser
AA seq
358 aa
AA seq
DB search
MSDRFAERLLRWFDQHGRKDLPWQRPGPDGRRDAYRVWLSEVMLQQTQVATVIPYFNRFV
ETLPTLRDLAEADEDTVLALWSGLGYYRRARFLHAAAQRCATEHGGTLPRAIDALLALPG
IGRSTAGAILAQSHGLRFPILDGNVKRVLARYHGVHGDPGKSTVEKQLWEHAERHTPAQR
TADYTQAIMDLGATVCTRNQPRCDDCPVREDCVARRDGLTTQLPTPKPGKRTPTRQTVML
VLRDTEGRILLERRGPQGVWSGLWSLPEAASPEEAWHVAGQRARLGDACALPSFIHVFSH
YKLAAEPWLFDRVTPLTGIADQAEVRWIAPSQGMQLGLPAPIRTLLDTLSESFPEDSP
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccggttcgccgaacgcctgctgcgctggttcgaccagcacggccgcaaggac
ctgccctggcagcggcccggcccggacgggaggcgcgacgcctaccgcgtgtggctgtcc
gaagtcatgctgcagcagacccaggtcgccaccgtcatcccctatttcaatcgcttcgtg
gagaccctgcccaccctgcgcgacctcgccgaagccgacgaggacacggtgctggcgctg
tggtccgggctgggctactaccggcgcgcccgcttcctgcacgccgcggcgcagcgatgc
gcgaccgagcacggcggcaccctgccacgcgccatcgatgcactgctcgcgctccccggc
atcggccgctcgaccgcgggcgcgatcctcgctcagtcccacgggctgcgcttcccgatc
ctcgacggcaacgtcaagcgtgtgctcgcccgctaccacggcgtgcacggcgacccgggg
aaatcgaccgtcgagaagcagctgtgggagcacgccgaaaggcataccccggcacagcga
accgccgactacacccaggcgatcatggatctgggcgccaccgtatgcacccgcaaccag
ccccgctgcgacgactgtccggtgcgcgaggactgcgtcgcccgccgcgacggcctcacc
acgcaactgcccaccccgaagccgggcaaacgcacgccgacccgacagacggtgatgctg
gtactgcgcgacaccgagggccgcatcctgctcgagcggcggggtccccagggcgtgtgg
tcgggcctgtggagcctgccggaagcagcatcgcccgaggaggcatggcacgtcgccgga
caacgcgcccggctcggcgacgcatgcgccctgccctccttcattcatgtcttcagccat
tacaagctcgccgcagaaccctggctgttcgaccgcgtgactcctctcaccgggatcgcc
gaccaggccgaagtgcgctggatcgcgccatcccagggcatgcaactgggcctgcccgcc
ccgatacgaaccctgctcgacacgctgtccgagagctttccggaggattccccatga
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