Dyella thiooxydans: ATSB10_07970
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Entry
ATSB10_07970 CDS
T04308
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
dtx
Dyella thiooxydans
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dtx03016
]
ATSB10_07970
Enzymes [BR:
dtx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ATSB10_07970
Transfer RNA biogenesis [BR:
dtx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ATSB10_07970
Prokaryotic type
ATSB10_07970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AND68251
UniProt:
A0A160MY49
LinkDB
All DBs
Position
838754..839770
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AA seq
338 aa
AA seq
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MSVSELPTAYGPVPLTARLRATPEDFQVEELLGYDADGAGEHALLWVEKRGANTDWVARE
LAKFAGVPPVNVGYAGLKDRHAVTRQTFSVQLPGRADPDWSAFPHQEVTVLGATRHSRKL
KRGGLRGNRFVIVLREVQGGREDAERVLQQIAARGVPNYFGEQRFGREGGNLAQARAMFA
GRRVDRDKRSLLLSAARSQIFNSVLAERVEQGSWDTALEGEIWALAGSRSWFGPEPFDAV
LAGRLAQGDIHPTGPLWGEGDPASQGAVAALEQRIAAGWQDLADGLTAARMSHDRRALRL
LPAGLAWNWLSADALELRFELPAGAYATTVIRELATTG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtttccgaattgcccaccgcctacggcccggtgccgctgaccgcccggctgcgc
gccacgcccgaggatttccaggtcgaggaactgctcggctacgacgccgacggtgccggc
gagcacgccctgctttgggtggagaagcgcggtgccaacaccgactgggtggcgcgggag
ctggcgaagttcgccggcgtaccgcccgtgaacgtgggctatgcggggctgaaggatcgc
catgcggtcacccggcagacattctcggtacaactgcccggtcgcgcggatccggactgg
tcggcgttcccccatcaggaggtgactgtgctcggggccacccgccacagtcgcaagctc
aagcgcggtggcttgcgcggcaaccgcttcgtgattgtcctgcgcgaggtgcagggcgga
cgcgaggatgccgagcgcgtgctgcagcagattgccgcccgcggtgtgccgaactacttc
ggcgaacagcgattcggccgcgagggcgggaatctggcccaggcccgcgcgatgttcgcc
gggcgccgggtggaccgcgacaaacgcagcctgctgctgtccgctgcgcgctcgcagatc
ttcaacagcgtgctcgccgagcgggtggagcaggggagctgggacacggcgctggagggt
gaaatctgggccctggccggatcgcgctcgtggttcggcccggagccgttcgatgcggtg
ctggccgggcggctggcgcagggcgatatccatccgacaggtccgttgtggggtgagggc
gatccggcctcgcagggcgcggtggctgcgctggagcagcgcatcgcggccggctggcag
gatcttgccgatggattgaccgctgcgcggatgagtcacgaccggcgtgcgctgcgcctg
ctgcccgccgggctggcctggaactggctatctgcggacgcgctcgagctgcgcttcgaa
ctgccggcgggcgcctatgcgacgacggtgatccgcgagttggccacgaccggctga
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