Dyella thiooxydans: ATSB10_08280
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Entry
ATSB10_08280 CDS
T04308
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
dtx
Dyella thiooxydans
Pathway
dtx00071
Fatty acid degradation
dtx00280
Valine, leucine and isoleucine degradation
dtx00310
Lysine degradation
dtx00362
Benzoate degradation
dtx00380
Tryptophan metabolism
dtx00410
beta-Alanine metabolism
dtx00640
Propanoate metabolism
dtx00650
Butanoate metabolism
dtx00907
Pinene, camphor and geraniol degradation
dtx00930
Caprolactam degradation
dtx01100
Metabolic pathways
dtx01110
Biosynthesis of secondary metabolites
dtx01120
Microbial metabolism in diverse environments
dtx01200
Carbon metabolism
dtx01212
Fatty acid metabolism
Module
dtx_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
ATSB10_08280
00650 Butanoate metabolism
ATSB10_08280
09103 Lipid metabolism
00071 Fatty acid degradation
ATSB10_08280
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
ATSB10_08280
00310 Lysine degradation
ATSB10_08280
00380 Tryptophan metabolism
ATSB10_08280
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
ATSB10_08280
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
ATSB10_08280
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ATSB10_08280
00930 Caprolactam degradation
ATSB10_08280
Enzymes [BR:
dtx01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
ATSB10_08280
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
ATSB10_08280
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
ATSB10_08280
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
Pyr_redox_2
NAD_binding_2
UDPG_MGDP_dh_N
AlaDh_PNT_C
ApbA
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AND68282
UniProt:
A0A160MZT4
LinkDB
All DBs
Position
complement(872342..874372)
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AA seq
676 aa
AA seq
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MDDNGVVTLSLDRAGSSANAISRAVLDELEQIVERLAIEKPAGVIIHSAKASGFAVGADI
REFVNYAAQGTVRENIEHGQRVFEQLARLPCPTVAAIHGACMGGGTELVLACRQRIAADD
DSTRIGLPEVMLGIHPGWGGSARLPRLIGATDALPVMLTGKPLSARRALALGVVDRIAPA
NELLAEARTLLRRPQQRPLSRRVKAWATNLWPVRQALAPMVVKQTAAKVRREHYPAPFAL
IEIWRRGNGSIQQRLKLEARSVAKLADTPTAHNLIRIFFLQERLKHQGAGIEHDIAHVHV
VGAGVMGGDIAAWCALKGFQVTLQDREMKYVQPALERARKLYEKKLKTQEKIESAARRLR
ADVEGKGVAEADLAIEAIFENAEAKRALYAVIEPQFQASEILASNTSSIPLDELSTSLAH
PQRFLGLHFFNPVAQMPLVEVVRHKGLDDAVEKRALAFCKALGKLPVAVKGTPGFLVNRI
LMPYLLESLRLYSEGVPGPVLDREAKKFGMPMGPIELADTVGLDVCASVGKELAPFLGLE
LPPGIEDRLEAGKRGKKDGAGLYLWEDGKPKKPEVDPDYTPAADLQDRMILPMVNEAVAC
LAENVVDDADLLDAGVIFGTGFAPFRGGPIAYARSEGVEALKGRLEKLARVHGIRFTPKA
GWDLPELRESPRLDAG
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
ttggacgacaacggcgtcgtcacgctttcgctggacagggctggcagcagcgccaacgcc
atctcgcgggcggtgcttgacgaactggaacagatcgtcgagcgcctggccatcgagaag
ccggccggcgtgatcatccactcggcaaaagcctccgggttcgccgtaggcgcggacatc
cgggaattcgtgaactacgccgcacagggcacggtgcgggaaaacatcgagcacggacag
cgcgtattcgagcagcttgcgcgcctgccctgcccgacggtcgccgccatccatggagcc
tgcatggggggcggcacggagctggtgctggcgtgtcgccagcgtatcgccgccgatgac
gactcgacgcggatcggcctgcccgaggtgatgctggggatccatcccggctggggcggc
tcggcaagactgccccgcctgattggcgccaccgacgccctgccggtcatgctcaccggc
aagccgctgtccgccaggcgcgcgctggcgctcggagtggtcgaccggatcgcaccggcg
aacgaactcctggccgaggcacgcaccctgctccgacgcccgcagcagcgtccgctttcg
cgacgcgtgaaggcctgggcgaccaacctgtggccggtacgccaggcgttggctccgatg
gtggtcaagcagaccgccgccaaggtgcgccgcgagcactacccggcgccgttcgccctc
atcgagatctggcgtcgtggcaacggctcgatccagcaacggctgaagctcgaggcgcgc
tcggtggcgaagctggccgatacaccaacggcgcacaacctgatccgcatcttctttctg
caggaacgcctcaagcatcagggggccggcatcgagcatgacatcgcgcatgtccacgtg
gtgggcgcgggcgtgatgggcggcgacatcgccgcctggtgcgcgctgaagggcttccag
gtgaccctgcaggaccgcgagatgaaatacgtgcaacctgcactggagcgggcgcgcaag
ctgtatgagaagaagctcaagacgcaggaaaagatcgagtctgccgcgcgccgcctgcgc
gcagatgtcgagggcaaaggcgtagccgaagccgatctggcgatcgaagcgatcttcgaa
aacgcggaggccaaacgggcactttatgcggtgatcgagccgcagttccaggccagtgaa
atcctggcaagcaacacctcgagcatccccctggacgagctgagcacctcgctggcgcac
ccccagcgcttcctgggtctgcatttcttcaacccggtggcacagatgccgctggtcgaa
gtggtgcgacacaaggggctcgacgacgccgtggagaaacgcgcactggccttctgcaag
gcccttggcaagctgccggtcgcagtgaaaggtacgccaggcttcctggtcaaccgcatt
ctcatgccctacctgctcgagtcgttgcgtctttacagcgagggcgtgccgggtccggta
cttgaccgcgaggcgaagaaattcggcatgccgatgggcccgatcgagctggccgacacg
gtcggtctggatgtgtgcgcctcggtaggcaaggagcttgccccgttccttggtctcgag
ctgcctccggggatcgaggatcgcctcgaagccgggaagcgcggcaagaaagatggggcc
ggcctttacctctgggaagacggcaaaccgaagaagcccgaagtcgatccggactacact
ccggccgccgatttgcaggatcgcatgatcctgcccatggtgaacgaagcggtcgcctgt
ctcgccgagaacgtggtcgacgacgcggatctgctcgatgcgggcgtcatcttcggtacg
ggtttcgcgccgttccgcggcggcccgatcgcctacgcacgcagcgagggggtcgaggcg
ctcaaggggcgactggaaaagctggccagggtccacggcatccgcttcacgcccaaggcc
ggctgggacctgcctgagctgcgcgagtcacccaggctcgacgcgggctga
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