Dyella thiooxydans: ATSB10_08390
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Entry
ATSB10_08390 CDS
T04308
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dtx
Dyella thiooxydans
Pathway
dtx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ATSB10_08390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dtx03019
]
ATSB10_08390
03009 Ribosome biogenesis [BR:
dtx03009
]
ATSB10_08390
03036 Chromosome and associated proteins [BR:
dtx03036
]
ATSB10_08390
Enzymes [BR:
dtx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ATSB10_08390
Messenger RNA biogenesis [BR:
dtx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ATSB10_08390
Ribosome biogenesis [BR:
dtx03009
]
Eukaryotic type
90S particles
RNase
ATSB10_08390
Prokaryotic type
rRNA processing factors
ATSB10_08390
Chromosome and associated proteins [BR:
dtx03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ATSB10_08390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
CBP66
Motif
Other DBs
NCBI-ProteinID:
AND68293
UniProt:
A0A160MY91
LinkDB
All DBs
Position
884061..884717
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AA seq
218 aa
AA seq
DB search
MALDYRFRDPSLVDLALTHRSVGKPNNERLEFLGDAFLGAIVAEMLYEAHPNASEGELSR
LRAQLVNGQALAVIARELELGDRLRLGPGELKSGGFRRESILADAFEALIAAVYLDGGFD
ACRGVVQRLFSDRVAALPRSSKDAKTRLQEHLQALGLPLPRYELLASHGDDHAKQFDVLC
LVSEPLVVEAAATASSRRAAEQEAAESVLSRLLEASKD
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
ttggcgctcgattatcgtttccgcgatccgtcgctggtcgacctggcgctgacccatcgc
agcgtcgggaagccgaacaacgagcggcttgaattcctcggcgatgcctttcttggggcg
atcgtcgccgagatgctctacgaggcgcatcccaatgccagcgagggcgagctttcccgc
cttcgcgcgcagctcgtgaacggccaggcactggcggtgatcgcgcgggagctcgagctg
ggtgatcggcttcggcttggtcccggcgagttgaagagcggtggcttccgtcgcgagtcg
atccttgccgacgcattcgaggcgctgatcgcggcggtgtacctggacggcgggttcgat
gcttgccgcggggtcgtgcagcgcctgttctccgaccgtgtcgcagcgttgccacgctcg
tccaaggatgccaagacccggctgcaggagcatctgcaggcgcttgggttgccgctgccg
cgttacgagctgcttgccagccacggcgacgaccatgccaagcagttcgacgtgctctgc
ctggtcagcgaaccgctggtggtggaagccgccgctaccgcttcgagccgccgtgctgcg
gagcaggaggctgccgaatcggtgctgtcccgcctgctggaagcgtcgaaagactga
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