KEGG   Dyella thiooxydans: ATSB10_16630
Entry
ATSB10_16630      CDS       T04308                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
dtx  Dyella thiooxydans
Pathway
dtx02024  Quorum sensing
dtx03060  Protein export
dtx03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dtx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    ATSB10_16630
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    ATSB10_16630
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ATSB10_16630
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dtx02044]
    ATSB10_16630
Enzymes [BR:dtx01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     ATSB10_16630
Secretion system [BR:dtx02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   ATSB10_16630
  Eukaryotic Sec-SRP protein
   ATSB10_16630
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 cobW Zeta_toxin AAA_16 AAA_33 AAA_31 APS_kinase KTI12 YqeC AAA_24 ATP_bind_1 AAA_14 Fer4_NifH Helicase_RecD AAA_30 NACHT 6PF2K TsaE Thymidylate_kin ArsA_ATPase
Other DBs
NCBI-ProteinID: AND69117
UniProt: A0A160N141
LinkDB
Position
complement(1790891..1792273)
AA seq 460 aa
MFESLSQRLSSTVNRLRGRGRLTEENIRESLREVRIALLEADVALPVVQALIERVKVRAV
GQEVLKSLSPGQALVKVVSDELTAVMGTVNTELNLAQTPPAVVLMAGLQGAGKTTTVGKL
ARFLTERKKKRVMVVSCDVYRPAAIEQLRTLAEQVGVSFFPSEAGQSPVDIAKNAIAAAR
REVIDVLLVDTAGRLSVDQAMMDEIKALHAAITPVETLFVVDAMTGQDAANTAKAFAEAL
PLTGVVLTKTDGDARGGAALSVRYVTGRPIKFLGAGEKSDALEPFHPDRVAQRILGMGDV
LSLVEEVERKVDHEKAQKLATKVMKGKRFDLNDMRDQLEQMSNMGGLAGLMDKLPGMASV
PDNVKSKVNDGELKKMVAIIQSMTKKERRHPDLLNGSRRARVARGSGTQPADVNRLLKQY
MQMEKMMSKLAKGGSKGLLRQMRGAMKGMGGMGGGLPPMR
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgttcgagtcgctcagccaacgcctctcctccaccgtcaaccgcctgcgcggtcgcggt
cgcctgaccgaggagaacatccgcgagtcgctgcgcgaggtgcgcatcgccctgctcgag
gccgacgtcgccctgccggtggtgcaggcgctgatcgagcgggtcaaggtgcgcgcggtc
ggccaggaggtgctcaagagcctgtcgccgggccaggcgctggtgaaggtggtcagcgac
gagctgaccgcggtgatgggcacggtcaacaccgagctcaacctcgcccagacgccaccg
gcggtggtgctgatggccggcctgcagggcgctggcaagaccaccacggtgggcaagctg
gcccgcttcctgaccgaacgcaagaagaagcgggtgatggtggtcagctgcgacgtctac
cgtccggcggcgatcgagcagttgcgcacgctggccgaacaggtcggcgtgagcttcttc
ccgtccgaggcgggccagagcccggtcgacatcgcgaagaacgcgatcgccgcggcccgc
cgcgaagtgatcgacgtgctgctggtggacaccgccggccgcctcagcgtcgaccaggcg
atgatggacgagatcaaggcgctccacgccgcgatcaccccggtagagaccctgttcgtg
gtcgacgcgatgaccggccaggacgcggccaacaccgccaaggccttcgccgaggcgctg
ccgctcaccggcgtggtgctgaccaagaccgatggtgacgcccgcggcggtgcggcgctg
tcggtgcgctatgtcaccggccggccgatcaagttcctcggcgccggcgagaagtccgat
gcgctggaaccgttccacccggaccgcgtggcacagcgcatcctcggcatgggcgacgtg
ctgtcgctggtcgaggaggtcgagcgcaaggtcgaccatgaaaaggcgcagaagctcgcc
accaaggtgatgaagggcaagcgcttcgacctgaacgacatgcgggaccagctcgagcag
atgtccaacatgggcggcctggccggcctgatggacaagctgccgggcatggccagcgtg
ccggacaacgtgaagtcgaaggtcaacgacggcgagctcaagaagatggtcgcgatcatc
cagtcgatgaccaagaaggagcgccgccatcccgatctgctgaacggctcgcgccgcgcc
cgcgtggcccggggttccggcacccagccggccgatgtcaaccgcctgctcaagcagtac
atgcagatggaaaagatgatgtccaagctggccaagggcggcagcaagggcctgctgcgg
cagatgcgcggcgccatgaagggcatgggcggaatgggcggtggcctgccgccgatgcgc
tga

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